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2019_SCN_bioreactor_t3_planktonic_scaffold_93785_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2076..3863)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Schlesneria paludicola RepID=UPI00029ACEA6 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 592.0
  • Bit_score: 1152
  • Evalue 0.0
30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 593.0
  • Bit_score: 931
  • Evalue 8.80e-269
Ribosomal protein S1 {ECO:0000313|EMBL:ADG67452.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 593.0
  • Bit_score: 931
  • Evalue 4.40e-268

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1788
GGAATCAGCATGGTTGATCGGAATTTACTGCGAGAGTTTGATATCACGGACGAAGAGCTGGAGATGGCCGCCGACATCTCGCTCGCCGAAGCAGAGCATCTGGAAGAGGGAAGTCTCGACCATCTCTACAACCGCCGTGATGAAGGTTACGACGTCAACGCGGTCCTCGAAGGAACCGTCGTTCGCGTTGAAGGCGAAGAAGTTCTGATCGACATCGGGTACAAGAGCGAAGGCATTGTCCCGATCGACGAGTGGGAAGTTCCCCCCGTCGCGGGCGACAAAGTTTCCGTGCTGCTCGAGGAAATCGAAGACGAATTCGGCCTGATTCTGTTGTCGAAGAAGAAAGCCGACCGTATTCGCGAGTGGGAAAAGGTCATCAGCACCCACAAAGAAGGCGACGTCGTCGCTGGAAAGGTCTTGCGAAAGATCAAGGGTGGTTTGCTGGTCGACATTGGTGTCAACGTCTTCCTGCCTGCAAGCCAGGTCGACATTCGCCGTCCACAGGACATCGAATTCTATCGTGACAAGACGATTGAATGCTTGATTCTGAAGATTGATGAATCCCGCCGTAACATCGTCGTTTCTCGTCGCCGCCTGATCGAGTTGCAGCGCGAGAAGATGAAGAAGGACCTGCTGTCGGAAATCACAGAAGGTCAATTGCGTAAGGGTACGGTCAAGAACATCGCCGACTTCGGTGCGTTCGTGGACCTGGGCGGTATCGACGGTTTGCTGCACATTACCGACATGAGCTGGGGACGTATCGGCCATCCATCCGAGATGGTGAAGATCGACCAGGAAGTCGAAGTCATGATTCTGCACGTCGATCGCGACAAAGAAAAGATCGCTCTCGGCCTGAAGCAGAAAGAAAAGAGTCCTTGGGACAACGTCGAAGGCAAGTACCCAGTCGGAACGAAGATCCGCGGGGAAGTCGTCAACGTCATGTCTTACGGTGCATTCGTCAAGTTGGAAGACGGGATCGAAGGTCTCGTTCACATCAGCGAAATGTCCTGGACGAAGCGCGTCAATCACCCGACCGAACTCGTCAATCCTGGCGACGAAGTCGATGTGGTTGTGCTCGGTATCAACAAGGACAAGCAAGAGATTTCGCTGGGCATGAAGCAAGCTCAGCCGAATCCTTGGGACGAAGTGGCAGCCAAGTACCCACCAGGTGCCAGCGTCAGCGGTACGGTTCGCAATCTCACCAACTACGGTGCATTCATCGAGTTGGAAGAAGGCGTCGACGGCTTGCTGCACGTCAGCGATATGTCCTGGACCCGCAAGATCTCGCATGCCAACGAAATGCTGAAGAAGGGCGATCCAATCACTTGCCAAGTGATCTCGGTCGACCAAGAGCGCAAGCGAATTGCACTCGGTCTGAAGCAATTGGCTGGGGACCCATGGGAAACCACGATTCCCGAAAAGTACCAACCCGGTGCACAGGTCATCGGCAAGGTTACGAAGATCACCAACTTCGGTGTCTTTGTTGAACTTGAGCCGGAACTCGAAGGCCTGCTTCACGTTTCGGAACTCTCGGACCAAAAGGTCGAGAACCCCGAAACATTCGTCAAGGTTGGCCAAGAACTGGACGTCCGCATCCTGCGTATCGATTCCACAGACCGCAAAATCGGTCTCAGCCGTAAATCGAACCTCGATTTGAGCGGTTCGGAAGAAGGCAAGTCGACCGAGACGACCGCGGCTCCAAAGCCACGAGCGGAACTCAAGGGCGGTATGGAAGGTGGATCAGCTGGTCCGCTGTTCTCGTTGGGCGGAAGCTCTGACAAGGAATAG
PROTEIN sequence
Length: 596
GISMVDRNLLREFDITDEELEMAADISLAEAEHLEEGSLDHLYNRRDEGYDVNAVLEGTVVRVEGEEVLIDIGYKSEGIVPIDEWEVPPVAGDKVSVLLEEIEDEFGLILLSKKKADRIREWEKVISTHKEGDVVAGKVLRKIKGGLLVDIGVNVFLPASQVDIRRPQDIEFYRDKTIECLILKIDESRRNIVVSRRRLIELQREKMKKDLLSEITEGQLRKGTVKNIADFGAFVDLGGIDGLLHITDMSWGRIGHPSEMVKIDQEVEVMILHVDRDKEKIALGLKQKEKSPWDNVEGKYPVGTKIRGEVVNVMSYGAFVKLEDGIEGLVHISEMSWTKRVNHPTELVNPGDEVDVVVLGINKDKQEISLGMKQAQPNPWDEVAAKYPPGASVSGTVRNLTNYGAFIELEEGVDGLLHVSDMSWTRKISHANEMLKKGDPITCQVISVDQERKRIALGLKQLAGDPWETTIPEKYQPGAQVIGKVTKITNFGVFVELEPELEGLLHVSELSDQKVENPETFVKVGQELDVRILRIDSTDRKIGLSRKSNLDLSGSEEGKSTETTAAPKPRAELKGGMEGGSAGPLFSLGGSSDKE*