ggKbase home page

GWC1_Treponema_61_84_gwc1_scaffold_981

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC1_Treponema_61_84_gwc1_scaffold_981_1
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(2..1702)
DNA (1701bp) protein (567aa)
PAS/PAC sensor signal transduction histidine kinase Tax=GWC1_Treponema_61_84_curated
PAS/PAC sensor signal transduction histidine kinase id=3394027 bin=GWA1_Treponema_62_8 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
PAS/PAC sensor signal transduction histidine kinase
GWC1_Treponema_61_84_gwc1_scaffold_981_2
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(1845..3233)
DNA (1389bp) protein (463aa)
polygalacturonase (EC:3.2.1.15) Tax=GWC1_Treponema_61_84_curated
polygalacturonase (EC:3.2.1.15)
Polygalacturonase id=3394025 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
GWC1_Treponema_61_84_gwc1_scaffold_981_3
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

3310..5052
DNA (1743bp) protein (581aa)
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial Tax=GWC1_Treponema_61_84_curated
ABC transporter related protein id=3394022 bin=GWA1_Treponema_62_8 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
ABC transporter
GWC1_Treponema_61_84_gwc1_scaffold_981_4
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

5055..7166
DNA (2112bp) protein (704aa)
multidrug ABC transporter ATPase Tax=GWC1_Treponema_61_84_curated
ABC-type multidrug/protein/lipid transport system, ATPase component id=3301581 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
multidrug ABC transporter ATPase
GWC1_Treponema_61_84_gwc1_scaffold_981_trna_1
unknown

Not on your lists

comp(7212..7285)
DNA (74bp)
transferRNA
GWC1_Treponema_61_84_gwc1_scaffold_981_5
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(7642..8286)
DNA (645bp) protein (215aa)
Response regulator receiver protein id=3301578 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
response regulator receiver protein Tax=GWC1_Treponema_61_84_curated
response regulator receiver protein
GWC1_Treponema_61_84_gwc1_scaffold_981_6
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(8288..8989)
DNA (702bp) protein (234aa)
Phage shock protein A, PspA id=3301575 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
phage shock protein A, PspA; K03969 phage shock protein A Tax=GWC1_Treponema_61_84_curated
phage shock protein A, PspA
GWC1_Treponema_61_84_gwc1_scaffold_981_7
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(9023..9406)
DNA (384bp) protein (128aa)
Putative uncharacterized protein id=3301572 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein Tax=GWC1_Treponema_61_84_curated
hypothetical protein
GWC1_Treponema_61_84_gwc1_scaffold_981_8
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(9416..9967)
DNA (552bp) protein (184aa)
Stage II sporulation protein id=3301567 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
anti-sigma-factor antagonist Tax=GWC1_Treponema_61_84_curated
anti-sigma-factor antagonist rbh
GWC1_Treponema_61_84_gwc1_scaffold_981_9
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

10223..10960
DNA (738bp) protein (246aa)
RNA methyltransferase, TrmH family, group 1 id=3301564 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
RNA methyltransferase, TrmH family, group 1 Tax=GWC1_Treponema_61_84_curated
RNA methyltransferase, TrmH family, group 1
GWC1_Treponema_61_84_gwc1_scaffold_981_10
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

10993..11463
DNA (471bp) protein (157aa)
Putative uncharacterized protein id=3301561 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein Tax=GWC1_Treponema_61_84_curated
hypothetical protein
GWC1_Treponema_61_84_gwc1_scaffold_981_11
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(11467..12606)
DNA (1140bp) protein (380aa)
Putative two component, sigma54 specific, transcriptional regulator id=3301557 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
putative two component, sigma54 specific, transcriptional regulator Tax=GWC1_Treponema_61_84_curated
putative two component, sigma54 specific, transcriptional regulator
GWC1_Treponema_61_84_gwc1_scaffold_981_12
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(12610..13374)
DNA (765bp) protein (255aa)
WecB/TagA/CpsF family glycosyl transferase; K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=GWC1_Treponema_61_84_curated
Glycosyl transferase, WecB/TagA/CpsF family id=3301552 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
WecB/TagA/CpsF family glycosyl transferase rbh
GWC1_Treponema_61_84_gwc1_scaffold_981_13
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(13332..14171)
DNA (840bp) protein (280aa)
ribosomal RNA small subunit methyltransferase E; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=GWC1_Treponema_61_84_curated
Ribosomal RNA small subunit methyltransferase E id=3301543 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
ribosomal RNA small subunit methyltransferase E
GWC1_Treponema_61_84_gwc1_scaffold_981_14
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(14185..15747)
DNA (1563bp) protein (521aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=GWC1_Treponema_61_84_curated
Carboxyl-terminal protease n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYH5_SPICH
carboxyl-terminal protease
GWC1_Treponema_61_84_gwc1_scaffold_981_15
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

15822..16307
DNA (486bp) protein (162aa)
Tax=GWC1_Treponema_61_84_curated
GWC1_Treponema_61_84_gwc1_scaffold_981_16
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

16307..17446
DNA (1140bp) protein (380aa)
Putative flagellar synthesis regulator FleN n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYH7_SPICH
putative flagellar synthesis regulator FleN; K04562 flagellar biosynthesis protein FlhG Tax=GWC1_Treponema_61_84_curated
putative flagellar synthesis regulator FleN
GWC1_Treponema_61_84_gwc1_scaffold_981_17
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

17503..20436
DNA (2934bp) protein (978aa)
hypothetical protein Tax=GWC1_Treponema_61_84_curated
Putative uncharacterized protein id=3636798 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein
GWC1_Treponema_61_84_gwc1_scaffold_981_18
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

20638..21675
DNA (1038bp) protein (346aa)
Prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=GWC1_Treponema_61_84_curated
Prolipoprotein diacylglyceryl transferase id=3636801 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Prolipoprotein diacylglyceryl transferase
GWC1_Treponema_61_84_gwc1_scaffold_981_19
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

21684..21866
DNA (183bp) protein (61aa)
id=3636804 bin=GWA1_Treponema_62_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
id=3636804 Tax=GWC1_Treponema_61_84_curated
GWC1_Treponema_61_84_gwc1_scaffold_981_20
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

21901..23253
DNA (1353bp) protein (451aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=GWC1_Treponema_61_84_curated
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase id=3636805 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
GWC1_Treponema_61_84_gwc1_scaffold_981_21
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

23315..25363
DNA (2049bp) protein (683aa)
Putative uncharacterized protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YC32_TREAZ
plasmid pRiA4b ORF-3 family protein Tax=GWC1_Treponema_61_84_curated
plasmid pRiA4b ORF-3 family protein
GWC1_Treponema_61_84_gwc1_scaffold_981_22
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

25360..25854
DNA (495bp) protein (165aa)
PTS system fructose subfamily transporter subunit IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=GWC1_Treponema_61_84_curated
PTS system IIA component, fructose subfamily id=3636810 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
PTS system fructose subfamily transporter subunit IIA
GWC1_Treponema_61_84_gwc1_scaffold_981_23
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

25854..26417
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=3636845 bin=GWA1_Treponema_62_8 species=Streptomyces sp. C genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
hypothetical protein Tax=GWC1_Treponema_61_84_curated
hypothetical protein
GWC1_Treponema_61_84_gwc1_scaffold_981_24
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

26440..28416
DNA (1977bp) protein (659aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=GWC1_Treponema_61_84_curated
transketolase (EC:2.2.1.1)
Transketolase id=3636846 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
GWC1_Treponema_61_84_gwc1_scaffold_981_25
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(28458..29147)
DNA (690bp) protein (230aa)
Haloacid dehalogenase domain protein hydrolase id=3636847 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Haloacid dehalogenase domain-containing protein hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=GWC1_Treponema_61_84_curated
Haloacid dehalogenase domain-containing protein hydrolase
GWC1_Treponema_61_84_gwc1_scaffold_981_26
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(29147..29452)
DNA (306bp) protein (102aa)
hypothetical protein TpriZ_07898 id=3636848 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Trp repressor; K03720 TrpR family transcriptional regulator, trp operon repressor Tax=GWC1_Treponema_61_84_curated
Trp repressor
GWC1_Treponema_61_84_gwc1_scaffold_981_27
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

29505..29693
DNA (189bp) protein (63aa)
Conserved domain protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QSH6_PERMH
hypothetical protein Tax=GWC1_Treponema_61_84_curated
hypothetical protein
GWC1_Treponema_61_84_gwc1_scaffold_981_28
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(29988..30113)
DNA (126bp) protein (42aa)
Tax=GWC1_Treponema_61_84_curated
Displaying 29 items

View Taxonomy