ggKbase home page

GWB1_Spirochaetales_60_80_GWB1_scaffold_1956

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_1
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

2..2254
DNA (2253bp) protein (751aa)
id=2952365 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
id=2952365 Tax=GWB1_Spirochaetes_60_80_curated
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_2
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

2247..3542
DNA (1296bp) protein (432aa)
Uncharacterized protein id=2952366 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_3
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(3645..4082)
DNA (438bp) protein (146aa)
Chemotaxis protein Chey id=3223394 bin=GWB1_Spirochaetales_60_80 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
chemotaxis protein Chey; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWB1_Spirochaetes_60_80_curated
chemotaxis protein Chey
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_4
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

4484..6391
DNA (1908bp) protein (636aa)
hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
Putative uncharacterized protein id=3223401 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_5
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

6495..6944
DNA (450bp) protein (150aa)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=GWB1_Spirochaetes_60_80_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase id=2952371 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_6
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

7010..8113
DNA (1104bp) protein (368aa)
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWB1_Spirochaetes_60_80_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=2952375 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_7
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(8165..11548)
DNA (3384bp) protein (1128aa)
Putative chromosome partition protein id=2952377 bin=GWF1_Spirochaetes_60_12 species=Bordetella parapertussis genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
chromosome partition protein Tax=GWB1_Spirochaetes_60_80_curated
chromosome partition protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_8
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(11545..12873)
DNA (1329bp) protein (443aa)
Nuclease SbcCD, D subunit id=2952380 bin=GWF1_Spirochaetes_60_12 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
nuclease SbcCD subunit D; K03547 exonuclease SbcD Tax=GWB1_Spirochaetes_60_80_curated
nuclease SbcCD subunit D
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_9
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(12920..14305)
DNA (1386bp) protein (462aa)
putative UDP-N-acetylhexosamine pyrophosphorylase (EC:2.7.7.-); K00972 UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] Tax=GWB1_Spirochaetes_60_80_curated
UDP-N-acetylglucosamine diphosphorylase id=2952387 bin=GWF1_Spirochaetes_60_12 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
2-alkenal reductase
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_10
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(14395..15030)
DNA (636bp) protein (212aa)
id=2952391 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
id=2952391 Tax=GWB1_Spirochaetes_60_80_curated
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_11
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

15166..15756
DNA (591bp) protein (197aa)
Translation initiation factor IF-3 id=2952393 bin=GWF1_Spirochaetes_60_12 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=GWB1_Spirochaetes_60_80_curated
Translation initiation factor IF-3
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_12
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


15778..15978
DNA (201bp) protein (67aa)
50S ribosomal protein L35 id=2952400 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=GWB1_Spirochaetes_60_80_curated
rpmI; 50S ribosomal protein L35
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_13
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists


16211..16570
DNA (360bp) protein (120aa)
50S ribosomal protein L20 id=3223430 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=GWB1_Spirochaetes_60_80_curated
50S ribosomal protein L20
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_14
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

16575..17036
DNA (462bp) protein (154aa)
hypothetical protein TpriZ_13194 id=2952414 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_15
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

17044..17406
DNA (363bp) protein (121aa)
Uncharacterized protein id=2952420 bin=GWF1_Spirochaetes_60_12 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein; K09888 cell division protein ZapA Tax=GWB1_Spirochaetes_60_80_curated
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_16
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

17403..17594
DNA (192bp) protein (64aa)
RNA polymerase Rpb6; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=GWB1_Spirochaetes_60_80_curated
RNA polymerase Rpb6 id=2952425 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
RNA polymerase Rpb6
GWB1_Spirochaetales_60_80_GWB1_scaffold_1956_17
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

17572..18567
DNA (996bp) protein (332aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWB1_Spirochaetes_60_80_curated
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA isopentenyltransferase id=2952428 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Displaying 17 items

View Taxonomy