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GWF1_CP_41_5_gwf1_scaffold_1777

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_CP_41_5_gwf1_scaffold_1777_1
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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3..1745
DNA (1743bp) protein (581aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=GWF1_Spirochaetes_41_5_curated
Isoleucine--tRNA ligase id=3210706 bin=GWF2_Lentisphaerae_49_21 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
isoleucyl-tRNA synthetase
GWF1_CP_41_5_gwf1_scaffold_1777_2
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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1747..2733
DNA (987bp) protein (329aa)
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family Tax=GWF1_Spirochaetes_41_5_curated
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family id=14425326 bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ParB domain-containing protein nuclease
GWF1_CP_41_5_gwf1_scaffold_1777_3
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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2734..3099
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI000381B26C
transcriptional regulatory protein Tax=GWF1_Spirochaetes_41_5_curated
hypothetical protein
GWF1_CP_41_5_gwf1_scaffold_1777_4
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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3105..4346
DNA (1242bp) protein (414aa)
Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1777_5
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(4296..4796)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Arthrospira platensis RepID=Q307D4_ARTPT
Putative uncharacterized protein Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1777_6
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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5348..6121
DNA (774bp) protein (258aa)
Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1777_7
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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6093..6929
DNA (837bp) protein (279aa)
Conserved uncharacterized protein, DUF610 n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NLK6_DESTT
hypothetical protein; K09798 hypothetical protein Tax=GWF1_Spirochaetes_41_5_curated
hypothetical protein
GWF1_CP_41_5_gwf1_scaffold_1777_8
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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6929..7945
DNA (1017bp) protein (339aa)
gcp; O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=GWF1_Spirochaetes_41_5_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) RepID=TSAD_BRAHW
gcp; O-sialoglycoprotein endopeptidase
GWF1_CP_41_5_gwf1_scaffold_1777_9
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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7902..8702
DNA (801bp) protein (267aa)
sec-independent protein translocase protein TatD (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] Tax=GWF1_Spirochaetes_41_5_curated
sec-independent protein translocase protein TatD (EC:3.1.21.-)
Sec-independent protein translocase protein TatD n=1 Tax=Borrelia turicatae (strain 91E135) RepID=A1QYY8_BORT9
GWF1_CP_41_5_gwf1_scaffold_1777_10
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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8699..9166
DNA (468bp) protein (156aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=GWF1_Spirochaetes_41_5_curated
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K7L9_9FIRM
rRNA large subunit methyltransferase
GWF1_CP_41_5_gwf1_scaffold_1777_11
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(9132..9854)
DNA (723bp) protein (241aa)
fliS; endoflagellar biosynthesis chaperone; K02422 flagellar protein FliS Tax=GWF1_Spirochaetes_41_5_curated
Flagellar protein FliS id=1835115 bin=GWE2_Spirochaete_31_10 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
fliS; endoflagellar biosynthesis chaperone
GWF1_CP_41_5_gwf1_scaffold_1777_12
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(9922..11760)
DNA (1839bp) protein (613aa)
ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=GWF1_Spirochaetes_41_5_curated
Sugar ABC transporter, permease protein id=3714685 bin=GWA2_OP3_52_12 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
ABC transporter permease
GWF1_CP_41_5_gwf1_scaffold_1777_13
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(11792..12184)
DNA (393bp) protein (131aa)
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWF1_Spirochaetes_41_5_curated
Sugar transport system (Permease) (Binding protein dependent transporter) id=2513766 bin=GWF1_Spirochaetes_51_8 species=Bacillus halodurans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
binding-protein-dependent transporters inner membrane component
Displaying 13 items

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