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GWF1_CP_41_5_gwf1_scaffold_2559

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_CP_41_5_gwf1_scaffold_2559_1
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(2..505)
DNA (504bp) protein (168aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=GWF1_Spirochaetes_41_5_curated
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YG22_TREAZ
GWF1_CP_41_5_gwf1_scaffold_2559_2
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(522..4034)
DNA (3513bp) protein (1171aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWF1_Spirochaetes_41_5_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Brachyspira innocens RepID=UPI00037C1FDC
rpoB; DNA directed RNA polymerase subunit beta
GWF1_CP_41_5_gwf1_scaffold_2559_3
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(3977..4675)
DNA (699bp) protein (233aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWF1_Spirochaetes_41_5_curated
DNA-directed RNA polymerase subunit beta id=2563542 bin=GWF1_Spirochaetes_51_8 species=unknown genus=unknown taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
rpoB; DNA-directed RNA polymerase subunit beta
GWF1_CP_41_5_gwf1_scaffold_2559_4
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(4930..5307)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Selenomonas ruminantium RepID=I0GNP6_SELRL
rplL; putative 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=GWF1_Spirochaetes_41_5_curated
rplL; putative 50S ribosomal protein L7/L12
GWF1_CP_41_5_gwf1_scaffold_2559_5
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(5335..5853)
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0F7_THEOJ
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=GWF1_Spirochaetes_41_5_curated
50S ribosomal protein L10
GWF1_CP_41_5_gwf1_scaffold_2559_6
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(5877..6554)
DNA (678bp) protein (226aa)
rplA; 50S ribosomal protein L1 Tax=GWF1_Spirochaetes_41_5_curated
50S ribosomal protein L1 id=3436081 bin=GWB1_CP_36_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
rplA; 50S ribosomal protein L1
GWF1_CP_41_5_gwf1_scaffold_2559_7
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(6580..7002)
DNA (423bp) protein (141aa)
Ribosomal protein L11 (BL11) n=1 Tax=mine drainage metagenome RepID=E6PJ82_9ZZZZ
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=GWF1_Spirochaetes_41_5_curated
50S ribosomal protein L11
GWF1_CP_41_5_gwf1_scaffold_2559_8
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(7020..7556)
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQE9_9SPIR
nusG; transcription antitermination protein NusG Tax=GWF1_Spirochaetes_41_5_curated
nusG; transcription antitermination protein NusG
GWF1_CP_41_5_gwf1_scaffold_2559_9
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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comp(7567..7863)
DNA (297bp) protein (99aa)
Pututative preprotein translocase subunit SecE n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQM4_9SPIR
Pututative preprotein translocase subunit SecE Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_2559_trna_2
unknown

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comp(7891..7965)
DNA (75bp)
transferRNA
GWF1_CP_41_5_gwf1_scaffold_2559_trna_1
unknown

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comp(8158..8230)
DNA (73bp)
transferRNA
GWF1_CP_41_5_gwf1_scaffold_2559_10
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

8371..9360
DNA (990bp) protein (330aa)
mannose-6-phosphate isomerase (EC:5.3.1.8); K01809 mannose-6-phosphate isomerase [EC:5.3.1.8] Tax=GWF1_Spirochaetes_41_5_curated
mannose-6-phosphate isomerase (EC:5.3.1.8)
Phosphomannose isomerase id=3960725 bin=GWF2_Bacteroidetes_38_335 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
GWF1_CP_41_5_gwf1_scaffold_2559_11
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

9372..11216
DNA (1845bp) protein (615aa)
methionine synthase I/5,10-methylenetetrahydrofolate reductase (EC:2.1.1.10); K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=GWF1_Spirochaetes_41_5_curated
methionine synthase I/5,10-methylenetetrahydrofolate reductase (EC:2.1.1.10)
Methylenetetrahydrofolate reductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHT4_CHLTF
GWF1_CP_41_5_gwf1_scaffold_2559_12
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

11216..12526
DNA (1311bp) protein (437aa)
Lipoprotein releasing system transmembrane protein LolC/E family n=1 Tax=Brachyspira hampsonii 30446 RepID=L0X3M5_9SPIR
lolC; lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein Tax=GWF1_Spirochaetes_41_5_curated
lolC; lipoprotein releasing system transmembrane protein LolC/E family
GWF1_CP_41_5_gwf1_scaffold_2559_13
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

12519..13196
DNA (678bp) protein (226aa)
lolD; ABC transporter ATP-binding protein Tax=GWF1_Spirochaetes_41_5_curated
Phosphonate-transporting ATPase id=4706871 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
lolD; ABC transporter ATP-binding protein
GWF1_CP_41_5_gwf1_scaffold_2559_14
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

13197..13412
DNA (216bp) protein (72aa)
Tax=GWF1_Spirochaetes_41_5_curated
Displaying 16 items

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