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GWF1_CP_41_5_gwf1_scaffold_1065

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_CP_41_5_gwf1_scaffold_1065_1
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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106..942
DNA (837bp) protein (279aa)
rluD4; pseudouridine synthase (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWF1_Spirochaetes_41_5_curated
rluD4; pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase id=4070476 bin=GWA2_Bacteroidetes_42_15 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
GWF1_CP_41_5_gwf1_scaffold_1065_2
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

1151..1879
DNA (729bp) protein (243aa)
heat shock protein DnaJ domain-containing protein Tax=GWF1_Spirochaetes_41_5_curated
Heat shock protein DnaJ domain protein id=3304855 bin=GWC1_Spirochaetes_27_15 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
heat shock protein DnaJ domain-containing protein
GWF1_CP_41_5_gwf1_scaffold_1065_3
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

1845..3386
DNA (1542bp) protein (514aa)
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase elongator protein (EC:1.14.13.81) id=95850 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Fe-S oxidoreductase Tax=GWF1_Spirochaetes_41_5_curated
Fe-S oxidoreductase
GWF1_CP_41_5_gwf1_scaffold_1065_4
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(3493..4395)
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW66_9CHLR
DNA-binding domain-containing protein Tax=GWF1_Spirochaetes_41_5_curated
DNA-binding domain-containing protein
GWF1_CP_41_5_gwf1_scaffold_1065_5
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(4476..4994)
DNA (519bp) protein (173aa)
UvrD/REP ATP-dependent DNA helicase PcrA n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G757_9DELT
UvrD/REP helicase Tax=GWF1_Spirochaetes_41_5_curated
ATP-dependent DNA helicase Rep
GWF1_CP_41_5_gwf1_scaffold_1065_6
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(4937..6388)
DNA (1452bp) protein (484aa)
TIGR00375 family protein n=2 Tax=Oscillibacter RepID=U2S6V4_9FIRM
hypothetical protein Tax=GWF1_Spirochaetes_41_5_curated
hypothetical protein
GWF1_CP_41_5_gwf1_scaffold_1065_7
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(6372..7439)
DNA (1068bp) protein (356aa)
TIGR00375 family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFJ6_9FIRM
UvrD/REP helicase family protein Tax=GWF1_Spirochaetes_41_5_curated
UvrD/REP helicase family protein
GWF1_CP_41_5_gwf1_scaffold_1065_8
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

7759..8700
DNA (942bp) protein (314aa)
oxidoreductase (EC:1.1.1.1) Tax=GWF1_Spirochaetes_41_5_curated
oxidoreductase (EC:1.1.1.1)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00035FE1B9
GWF1_CP_41_5_gwf1_scaffold_1065_9
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

8721..10019
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000360EA9C
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWF1_Spirochaetes_41_5_curated
family 1 extracellular solute-binding protein
GWF1_CP_41_5_gwf1_scaffold_1065_10
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

10033..11154
DNA (1122bp) protein (374aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=GWF1_Spirochaetes_41_5_curated
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C1R7_THEGP
oxygen-independent coproporphyrinogen III oxidase
GWF1_CP_41_5_gwf1_scaffold_1065_11
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(11302..14778)
DNA (3477bp) protein (1159aa)
Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1065_12
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(14775..16727)
DNA (1953bp) protein (651aa)
Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1065_13
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(16724..18691)
DNA (1968bp) protein (656aa)
Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1065_14
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

18913..19380
DNA (468bp) protein (156aa)
Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1065_15
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(19806..21146)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036556E2
hypothetical protein; K07133 Tax=GWF1_Spirochaetes_41_5_curated
ATPase AAA
GWF1_CP_41_5_gwf1_scaffold_1065_16
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(21361..22140)
DNA (780bp) protein (260aa)
Flagellin modification protein A n=1 Tax=Arcobacter butzleri ED-1 RepID=G2HLX4_9PROT
flagellin modification protein A Tax=GWF1_Spirochaetes_41_5_curated
flagellin modification protein A
GWF1_CP_41_5_gwf1_scaffold_1065_17
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(22155..23465)
DNA (1311bp) protein (437aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWF1_Spirochaetes_41_5_curated
Aminotransferase class-III id=4855661 bin=GWC2_Nitrospirae-rel_56_14 species=Sulfurimonas autotrophica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
class III aminotransferase
GWF1_CP_41_5_gwf1_scaffold_1065_18
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(23559..24557)
DNA (999bp) protein (333aa)
NAD-dependent epimerase/dehydratase Tax=GWF1_Spirochaetes_41_5_curated
Nucleoside-diphosphate-sugar epimerase id=2491717 bin=GWB1_CP_36_13 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
NAD-dependent epimerase/dehydratase
GWF1_CP_41_5_gwf1_scaffold_1065_19
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

25129..25701
DNA (573bp) protein (191aa)
Marine sediment metagenome DNA, contig: S01H1_S03756 Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1065_20
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

25685..26752
DNA (1068bp) protein (356aa)
Tax=GWF1_Spirochaetes_41_5_curated
GWF1_CP_41_5_gwf1_scaffold_1065_21
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

26757..27479
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWF1_Spirochaetes_41_5_curated
LPS export ABC transporter, ATP-binding protein n=1 Tax=Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 RepID=R8ZXR6_9LEPT
ABC transporter ATP-binding protein
GWF1_CP_41_5_gwf1_scaffold_1065_22
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

27545..28927
DNA (1383bp) protein (461aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DXZ7_9FIRM
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=GWF1_Spirochaetes_41_5_curated
RNA polymerase sigma-54 subunit RpoN
GWF1_CP_41_5_gwf1_scaffold_1065_23
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

30391..31089
DNA (699bp) protein (233aa)
Transposase, IS5 family, putative n=2 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C3L1_ACAM1
IS5 family transposase Tax=GWF1_Spirochaetes_41_5_curated
IS5 family transposase
Displaying 23 items

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