ggKbase home page

GWF2_Clostridiales_38_85_gwf2_scaffold_1246

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_1
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(80..586)
DNA (507bp) protein (169aa)
Uncharacterized protein id=2987090 bin=GWF2_Clostridiales_38_85 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

815..2158
DNA (1344bp) protein (448aa)
MATE efflux family protein id=2987274 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
putative efflux protein, MATE family Tax=GWF2_Clostridiales_38_85_curated
putative efflux protein, MATE family
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_3
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(2243..2878)
DNA (636bp) protein (212aa)
Entner-Doudoroff aldolase (EC:4.1.3.16 4.1.2.14) Tax=GWF2_Clostridiales_38_85_curated
Entner-Doudoroff aldolase (EC:4.1.3.16 4.1.2.14)
KHG/KDPG aldolase id=2987277 bin=GWF2_Clostridiales_38_85 species=Eubacterium plexicaudatum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(2942..3715)
DNA (774bp) protein (258aa)
RNA polymerase sigma factor id=2987279 bin=GWF2_Clostridiales_38_85 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
sigma-B/F/G subfamily RNA polymerase sigma-28 factor; K03091 RNA polymerase sporulation-specific sigma factor Tax=GWF2_Clostridiales_38_85_curated
sigG; RNA polymerase sigma-G factor
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

3977..4411
DNA (435bp) protein (145aa)
id=2987281 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2987281 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_trna_1
unknown

Not on your lists

comp(4523..4596)
DNA (74bp)
transferRNA
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_6
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(4611..6242)
DNA (1632bp) protein (544aa)
ABC transporter permease; K01992 ABC-2 type transport system permease protein Tax=GWF2_Clostridiales_38_85_curated
ABC-type transport system, permease id=2987283 bin=GWF2_Clostridiales_38_85 species=Clostridium celatum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_7
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(6246..6953)
DNA (708bp) protein (236aa)
ABC transporter related id=2987285 bin=GWF2_Clostridiales_38_85 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWF2_Clostridiales_38_85_curated
ABC transporter
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_8
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

7255..7884
DNA (630bp) protein (210aa)
Putative uncharacterized protein id=2987287 bin=GWF2_Clostridiales_38_85 species=Eubacterium limosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_9
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(7889..8638)
DNA (750bp) protein (250aa)
hypothetical protein TpriZ_10689 id=2987289 bin=GWF2_Clostridiales_38_85 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
putative lipoprotein Tax=GWF2_Clostridiales_38_85_curated
putative lipoprotein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(8654..9022)
DNA (369bp) protein (123aa)
Mn-dependent transcriptional regulator Tax=GWF2_Clostridiales_38_85_curated
Iron-dependent transcriptional regulator id=2987291 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Mn-dependent transcriptional regulator
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_11
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

9250..10059
DNA (810bp) protein (270aa)
zupT; zinc transporter ZupT; K07238 zinc transporter, ZIP family Tax=GWF2_Clostridiales_38_85_curated
Zinc transporter ZupT id=2987294 bin=GWF2_Clostridiales_38_85 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
zupT; zinc transporter ZupT
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_12
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(10092..11162)
DNA (1071bp) protein (357aa)
Putative uncharacterized protein id=2987296 bin=GWF2_Clostridiales_38_85 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_13
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

11469..12146
DNA (678bp) protein (226aa)
id=2987298 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2987298 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

12274..13191
DNA (918bp) protein (306aa)
transcriptional regulator Tax=GWF2_Clostridiales_38_85_curated
Transcriptional regulator, putative id=2987299 bin=GWF2_Clostridiales_38_85 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
transcriptional regulator
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_15
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

13188..13598
DNA (411bp) protein (137aa)
Putative Zn-finger containing protein id=2987301 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Zn-finger containing protein Tax=GWF2_Clostridiales_38_85_curated
Zn-finger containing protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_16
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(13645..14757)
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein id=2987303 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ABC transporter-like protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=GWF2_Clostridiales_38_85_curated
ABC transporter
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_17
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(14935..15660)
DNA (726bp) protein (242aa)
Pseudouridine synthase id=2987305 bin=GWF2_Clostridiales_38_85 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
pseudouridine synthase family protein Tax=GWF2_Clostridiales_38_85_curated
pseudouridine synthase family protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_18
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(15660..15821)
DNA (162bp) protein (54aa)
id=2987307 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2987307 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_19
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(15887..16360)
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=2987308 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_20
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(16436..18328)
DNA (1893bp) protein (631aa)
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3 Tax=GWF2_Clostridiales_38_85_curated
ABC transporter related protein id=2987310 bin=GWF2_Clostridiales_38_85 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ABC transporter-like protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_21
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(18555..18761)
DNA (207bp) protein (69aa)
Uncharacterized protein id=2987311 bin=GWF2_Clostridiales_38_85 species=Eubacterium siraeum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
putative membrane protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

19046..19687
DNA (642bp) protein (214aa)
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] Tax=GWF2_Clostridiales_38_85_curated
tRNA (guanine-N(7)-)-methyltransferase id=2987312 bin=GWF2_Clostridiales_38_85 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
tRNA (guanine-N(7)-)-methyltransferase
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_23
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

19771..20988
DNA (1218bp) protein (406aa)
Methyltransferase (EC:2.1.1.-)
Methyltransferase id=2987313 bin=GWF2_Clostridiales_38_85 species=Listeria grayi genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
radc, ribosomal RNA adenine dimethylase Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_24
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(20989..22464)
DNA (1476bp) protein (492aa)
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13) Tax=GWF2_Clostridiales_38_85_curated
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase id=2987314 bin=GWF2_Clostridiales_38_85 species=Ruminococcus sp. 5_1_39BFAA genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_25
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(22439..23335)
DNA (897bp) protein (299aa)
diaminopimelate epimerase (EC:5.1.1.7) Tax=GWF2_Clostridiales_38_85_curated
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=2987315 bin=GWF2_Clostridiales_38_85 species=unknown genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_26
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

23448..24032
DNA (585bp) protein (195aa)
metal dependent phosphohydrolase; K08722 5'-nucleotidase [EC:3.1.3.5] Tax=GWF2_Clostridiales_38_85_curated
HD domain protein id=2987459 bin=GWF2_Clostridiales_38_85 species=Butyrivibrio crossotus genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
metal dependent phosphohydrolase
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_27
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

24049..24852
DNA (804bp) protein (268aa)
AP endonuclease, family 2 id=2987467 bin=GWF2_Clostridiales_38_85 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
xylose isomerase domain-containing protein Tax=GWF2_Clostridiales_38_85_curated
xylose isomerase domain-containing protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_28
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

25023..26456
DNA (1434bp) protein (478aa)
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11) Tax=GWF2_Clostridiales_38_85_curated
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase id=2987470 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1246_29
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

26608..26751
DNA (144bp) protein (48aa)
id=2987473 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2987473 Tax=GWF2_Clostridiales_38_85_curated
Displaying items 1-30 of 42 in total

View Taxonomy