ggKbase home page

GWF2_Clostridiales_38_85_gwf2_scaffold_1266

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_1
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(195..572)
DNA (378bp) protein (126aa)
hypothetical protein; K05919 superoxide reductase [EC:1.15.1.2] Tax=GWF2_Clostridiales_38_85_curated
Putative superoxide reductase id=3017457 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

797..1105
DNA (309bp) protein (103aa)
Thioredoxin id=3017459 bin=GWF2_Clostridiales_38_85 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
thioredoxin; K03671 thioredoxin 1 Tax=GWF2_Clostridiales_38_85_curated
thioredoxin
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_3
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(1180..1860)
DNA (681bp) protein (227aa)
Possible cAMP regulatory protein id=3017462 bin=GWF2_Clostridiales_38_85 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein Tax=GWF2_Clostridiales_38_85_curated
Crp family transcriptional regulator
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(1882..2748)
DNA (867bp) protein (289aa)
thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWF2_Clostridiales_38_85_curated
thioredoxin-disulfide reductase (EC:1.8.1.9)
Pyridine nucleotide-disulfide oxidoreductase id=3017466 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

2950..3792
DNA (843bp) protein (281aa)
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=GWF2_Clostridiales_38_85_curated
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=3017469 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_6
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

3830..5020
DNA (1191bp) protein (397aa)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83) Tax=GWF2_Clostridiales_38_85_curated
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase id=3017474 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_7
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

5207..5686
DNA (480bp) protein (160aa)
id=3017479 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=3017479 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_8
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

5764..6318
DNA (555bp) protein (185aa)
id=3017656 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=3017656 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_9
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

6296..6550
DNA (255bp) protein (85aa)
id=3017659 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=3017659 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

6568..7452
DNA (885bp) protein (295aa)
ABC-type multidrug transport system, ATPase component id=3017660 bin=GWF2_Clostridiales_38_85 species=Solibacillus silvestris genus=Solibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
multidrug ABC transporter ATPase Tax=GWF2_Clostridiales_38_85_curated
multidrug ABC transporter ATPase
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_11
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

7439..8635
DNA (1197bp) protein (399aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain id=3017663 bin=GWF2_Clostridiales_38_85 species=Solibacillus silvestris genus=Solibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_12
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(8676..11150)
DNA (2475bp) protein (825aa)
CoA-disulfide reductase (EC:1.8.1.14) Tax=GWF2_Clostridiales_38_85_curated
CoA-disulfide reductase (EC:1.8.1.14)
CoA-disulfide reductase id=3017666 bin=GWF2_Clostridiales_38_85 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_13
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(11306..12481)
DNA (1176bp) protein (392aa)
id=3017669 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=3017669 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(12495..13115)
DNA (621bp) protein (207aa)
id=3017670 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=3017670 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_15
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(13135..15057)
DNA (1923bp) protein (641aa)
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
Putative uncharacterized protein id=3017671 bin=GWF2_Clostridiales_38_85 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_16
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

15209..17866
DNA (2658bp) protein (886aa)
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
Putative uncharacterized protein id=3017673 bin=GWF2_Clostridiales_38_85 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_17
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(17913..18704)
DNA (792bp) protein (264aa)
Transcriptional regulator, IclR family id=3017675 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Transcriptional regulator, IclR family Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_18
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(18667..19812)
DNA (1146bp) protein (382aa)
4Fe-4S binding domain protein id=3017678 bin=GWF2_Clostridiales_38_85 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_19
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(19817..20686)
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=3017683 bin=GWF2_Clostridiales_38_85 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_20
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(20850..21287)
DNA (438bp) protein (146aa)
id=3017685 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=3017685 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_21
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

21454..21912
DNA (459bp) protein (153aa)
HIT family protein id=3017687 bin=GWF2_Clostridiales_38_85 species=Atopobium rimae genus=Atopobium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
histidine triad (HIT) protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

21912..22790
DNA (879bp) protein (293aa)
Putative ABC transporter, permease protein id=3017691 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
cobalt transporter; K02008 cobalt/nickel transport system permease protein Tax=GWF2_Clostridiales_38_85_curated
cobalt transporter
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_23
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

22763..24457
DNA (1695bp) protein (565aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain; K02006 cobalt/nickel transport system ATP-binding protein Tax=GWF2_Clostridiales_38_85_curated
Putative uncharacterized protein id=3017693 bin=GWF2_Clostridiales_38_85 species=Blautia hydrogenotrophica genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ABC transporter ATP-binding protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_24
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

24450..25160
DNA (711bp) protein (237aa)
hypothetical protein KJC30_11418 id=3017695 bin=GWF2_Clostridiales_38_85 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Predicted membrane protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_25
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

25147..25920
DNA (774bp) protein (258aa)
udp; uridine phosphorylase (EC:2.4.2.3); K00757 uridine phosphorylase [EC:2.4.2.3] Tax=GWF2_Clostridiales_38_85_curated
udp; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase id=3017699 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_26
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

25923..28133
DNA (2211bp) protein (737aa)
Bacterial capsule synthesis protein PGA_cap. Tax=GWF2_Clostridiales_38_85_curated
Bacterial capsule synthesis protein PGA_cap id=3017704 bin=GWF2_Clostridiales_38_85 species=Butyrivibrio fibrisolvens genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Bacterial capsule synthesis protein PGA_cap.
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_27
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

28371..29399
DNA (1029bp) protein (343aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=GWF2_Clostridiales_38_85_curated
D-alanine--D-alanine ligase domain protein id=3017709 bin=GWF2_Clostridiales_38_85 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
D-alanine--D-alanine ligase rbh
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_28
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

29396..30538
DNA (1143bp) protein (381aa)
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2); K01843 lysine 2,3-aminomutase [EC:5.4.3.2] Tax=GWF2_Clostridiales_38_85_curated
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2)
Lysine 2,3-aminomutase YodO family protein id=3017716 bin=GWF2_Clostridiales_38_85 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_29
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(30635..31984)
DNA (1350bp) protein (450aa)
id=3017723 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=3017723 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1266_30
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(32195..33448)
DNA (1254bp) protein (418aa)
Putative transcriptional regulator, GntR family id=3017725 bin=GWF2_Clostridiales_38_85 species=Ruminococcus albus genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GntR family transcriptional regulator Tax=GWF2_Clostridiales_38_85_curated
putative aminotransferase MSMEG_6286/MSMEI_6121
Displaying items 1-30 of 76 in total

View Taxonomy