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GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_1
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(486..1844)
DNA (1359bp) protein (453aa)
Putative NAD(P)-binding domain enzyme id=4141589 bin=GWF2_Lentisphaerae_38_69 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
NAD(P)-binding domain enzyme Tax=GWF2_Lentisphaerae_38_69_curated
NAD(P)-binding domain enzyme
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_2
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(1932..2942)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein id=4141590 bin=GWF2_Lentisphaerae_38_69 species=Lachnospiraceae bacterium 9_1_43BFAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=GWF2_Lentisphaerae_38_69_curated
oligopeptide/dipeptide ABC transporter, ATP-binding protein
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_3
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(2945..4120)
DNA (1176bp) protein (392aa)
tetraacyldisaccharide 4'-kinase; K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=GWF2_Lentisphaerae_38_69_curated
Tetraacyldisaccharide 4'-kinase id=4141591 bin=GWF2_Lentisphaerae_38_69 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
tetraacyldisaccharide 4'-kinase
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_4
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(4138..7356)
DNA (3219bp) protein (1073aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=GWF2_Lentisphaerae_38_69_curated
Transcription-repair coupling factor id=4141592 bin=GWF2_Lentisphaerae_38_69 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
transcription-repair coupling factor
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_5
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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7579..8961
DNA (1383bp) protein (461aa)
RNA polymerase sigma factor id=4141593 bin=GWF2_Lentisphaerae_38_69 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=GWF2_Lentisphaerae_38_69_curated
RpoD subfamily RNA polymerase sigma-70 subunit
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_6
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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9077..9247
DNA (171bp) protein (57aa)
30S ribosomal protein S21 id=4141594 bin=GWF2_Lentisphaerae_38_69 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
rpsU; ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=GWF2_Lentisphaerae_38_69_curated
rpsU; ribosomal protein S21
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_7
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(9353..10525)
DNA (1173bp) protein (391aa)
id=4141595 bin=GWF2_Lentisphaerae_38_69 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
id=4141595 Tax=GWF2_Lentisphaerae_38_69_curated
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_8
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(10540..11748)
DNA (1209bp) protein (403aa)
id=4141596 bin=GWF2_Lentisphaerae_38_69 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
id=4141596 Tax=GWF2_Lentisphaerae_38_69_curated
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_9
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(11762..12937)
DNA (1176bp) protein (392aa)
Efflux transporter, RND family, MFP subunit Tax=GWF2_Lentisphaerae_38_69_curated
Efflux transporter, RND family, MFP subunit id=4141597 bin=GWF2_Lentisphaerae_38_69 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_10
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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13403..14473
DNA (1071bp) protein (357aa)
PAS/PAC sensor signal transduction histidine kinase id=4141598 bin=GWF2_Lentisphaerae_38_69 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
PAS/PAC sensor signal transduction histidine kinase Tax=GWF2_Lentisphaerae_38_69_curated
PAS/PAC sensor signal transduction histidine kinase
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_11
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14410..14589)
DNA (180bp) protein (60aa)
id=4141599 bin=GWF2_Lentisphaerae_38_69 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
id=4141599 Tax=GWF2_Lentisphaerae_38_69_curated
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_12
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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14696..17290
DNA (2595bp) protein (865aa)
MCP methyltransferase/methylesterase (EC:2.1.1.80 3.1.1.61); K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] Tax=GWF2_Lentisphaerae_38_69_curated
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor id=4141600 bin=GWF2_Lentisphaerae_38_69 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
chemotaxis protein CheR
GWF2_Lentisphaerae_38_69_gwf2_scaffold_3912_13
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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17301..17411
DNA (111bp) protein (37aa)
Tax=GWF2_Lentisphaerae_38_69_curated
Displaying 13 items

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