ggKbase home page

GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

771..2216
DNA (1446bp) protein (482aa)
Putative uncharacterized protein id=3267983 bin=GWF2_Lentisphaerae_50_93 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2384..2932)
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) Tax=GWF2_Lentisphaerae_50_93_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase id=3267984 bin=GWF2_Lentisphaerae_50_93 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

3045..3920
DNA (876bp) protein (292aa)
id=3267985 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3267985 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

3968..4288
DNA (321bp) protein (107aa)
putative nucleotidyltransferase id=3267986 bin=GWF2_Lentisphaerae_50_93 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
DNA polymerase beta domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
DNA polymerase beta domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4269..4652
DNA (384bp) protein (128aa)
hypothetical protein OsccyDRAFT_2874 id=3267987 bin=GWF2_Lentisphaerae_50_93 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
HEPN domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
HEPN domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4690..5715
DNA (1026bp) protein (342aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=GWF2_Lentisphaerae_50_93_curated
Putative uncharacterized protein id=3267988 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5959..6120)
DNA (162bp) protein (54aa)
Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

6226..7593
DNA (1368bp) protein (456aa)
AAA ATPase central domain protein id=3268109 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
ATP/GTP-binding domain protein; K07478 putative ATPase Tax=GWF2_Lentisphaerae_50_93_curated
ATP/GTP-binding domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

7577..8149
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=GWF2_Lentisphaerae_50_93_curated
5-formyltetrahydrofolate cyclo-ligase id=3268112 bin=GWF2_Lentisphaerae_50_93 species=Thermocrinis albus genus=Thermocrinis taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
5-formyltetrahydrofolate cyclo-ligase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

8171..9760
DNA (1590bp) protein (530aa)
Ribonuclease Y id=3268114 bin=GWF2_Lentisphaerae_50_93 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
metal dependent phosphohydrolase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

9807..10592
DNA (786bp) protein (262aa)
Metallophosphoesterase id=3268116 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein; K09769 hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11095..11490)
DNA (396bp) protein (132aa)
PilT protein-like id=3268119 bin=GWF2_Lentisphaerae_50_93 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PilT-like protein Tax=GWF2_Lentisphaerae_50_93_curated
PilT-like protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11492..11728)
DNA (237bp) protein (79aa)
Uncharacterized protein id=3268121 bin=GWF2_Lentisphaerae_50_93 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

11899..12972
DNA (1074bp) protein (358aa)
idsA; Bifunctional short chain isoprenyl diphosphate synthase (idsA) (EC:2.5.1.10 2.5.1.1); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=GWF2_Lentisphaerae_50_
idsA; Bifunctional short chain isoprenyl diphosphate synthase (idsA) (EC:2.5.1.10 2.5.1.1)
Geranylgeranyl pyrophosphate synthetase id=3268123 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13052..14431)
DNA (1380bp) protein (460aa)
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=GWF2_Lentisphaerae_50_93_curated
id=3268125 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
DNA translocase FtsK
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(14569..15963)
DNA (1395bp) protein (465aa)
Signal recognition particle protein id=3268128 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=GWF2_Lentisphaerae_50_93_curated
ffh; signal recognition particle protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

16088..17761
DNA (1674bp) protein (558aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=GWF2_Lentisphaerae_50_93_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=3268130 bin=GWF2_Lentisphaerae_50_93 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

17843..19006
DNA (1164bp) protein (388aa)
Radical SAM domain protein id=3268131 bin=GWF2_Lentisphaerae_50_93 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
radical SAM protein; K06871 uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
radical SAM protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

19102..19311
DNA (210bp) protein (70aa)
id=3268132 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3268132 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

19301..19729
DNA (429bp) protein (143aa)
Putative nucleic-acid-binding protein id=3268133 bin=GWF2_Lentisphaerae_50_93 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_21
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

20436..21572
DNA (1137bp) protein (379aa)
Aldo/keto reductase id=3268135 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
aldo/keto reductase Tax=GWF2_Lentisphaerae_50_93_curated
aldo/keto reductase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_22
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(21732..22190)
DNA (459bp) protein (153aa)
FHA domain-containing protein id=3268136 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
FOG: FHA domain Tax=GWF2_Lentisphaerae_50_93_curated
FOG: FHA domain
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(22215..22442)
DNA (228bp) protein (76aa)
50S ribosomal protein L28 id=3268137 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=GWF2_Lentisphaerae_50_93_curated
50S ribosomal protein L28
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_trna_1
unknown

Not on your lists

comp(22576..22647)
DNA (72bp)
transferRNA
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_24
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(22743..23687)
DNA (945bp) protein (315aa)
Radical SAM domain protein id=3268138 bin=GWF2_Lentisphaerae_50_93 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Radical SAM domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
Radical SAM domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_25
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

23900..25030
DNA (1131bp) protein (377aa)
tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=GWF2_Lentisphaerae_50_93_
Teichoic acid linkage unit synthesis (Undecaprenylpyrophosphate-N-aetylglucosamine) id=3268139 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_26
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

25119..31544
DNA (6426bp) protein (2142aa)
Glycoside hydrolase family 45 (Fragment) id=3268140 bin=GWF2_Lentisphaerae_50_93 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_27
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(31717..32475)
DNA (759bp) protein (253aa)
Uncharacterized protein id=3268141 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_28
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

32818..35685
DNA (2868bp) protein (956aa)
id=3268142 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3268142 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1488_29
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

35846..36244
DNA (399bp) protein (133aa)
id=3268143 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3268143 Tax=GWF2_Lentisphaerae_50_93_curated
Displaying 30 items

View Taxonomy