ggKbase home page

GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

75..3905
DNA (3831bp) protein (1277aa)
PKD domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
RHS Repeat family id=4041967 bin=GWF2_Lentisphaerae_50_93 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PKD domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4336..5220
DNA (885bp) protein (295aa)
anaerobic cobalt chelatase; K02190 sirohydrochlorin cobaltochelatase [EC:4.99.1.3] Tax=GWF2_Lentisphaerae_50_93_curated
Cobalamin biosynthesis protein CbiK, Co2+ chelatase id=4041968 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
anaerobic cobalt chelatase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

5349..6077
DNA (729bp) protein (243aa)
precorrin-2 C(20)-methyltransferase; K03394 precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] Tax=GWF2_Lentisphaerae_50_93_curated
Precorrin-2 C20-methyltransferase id=4041969 bin=GWF2_Lentisphaerae_50_93 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
precorrin-2 C(20)-methyltransferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

6070..7017
DNA (948bp) protein (316aa)
Nucleoside recognition domain protein id=4041970 bin=GWF2_Lentisphaerae_50_93 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
nucleoside recognition domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
nucleoside recognition domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

7052..7726
DNA (675bp) protein (225aa)
precorrin isomerase (EC:5.4.1.2) Tax=GWF2_Lentisphaerae_50_93_curated
precorrin isomerase (EC:5.4.1.2)
Precorrin-8X methylmutase id=4042049 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

7728..8858
DNA (1131bp) protein (377aa)
cbiD; cobalamin biosynthesis protein CbiD; K02188 cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] Tax=GWF2_Lentisphaerae_50_93_curated
Putative cobalt-precorrin-6A synthase [deacetylating] id=4042051 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
cbiD; cobalamin biosynthesis protein CbiD
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

8908..10116
DNA (1209bp) protein (403aa)
precorrin-6y C5,15-methyltransferase subunit CbiE; K00595 precorrin-6Y C5,15-methyltransferase / precorrin-8W decarboxylase [EC:2.1.1.132 1.-.-.-] Tax=GWF2_Lentisphaerae_50_93_curated
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) id=4042052 bin=GWF2_Lentisphaerae_50_93 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
precorrin-6y C5,15-methyltransferase subunit CbiE
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

10148..11656
DNA (1509bp) protein (503aa)
Putative uncharacterized protein id=4042053 bin=GWF2_Lentisphaerae_50_93 species=Bilophila sp. 4_1_30 genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
precorrin-4 C11-methyltransferase Tax=GWF2_Lentisphaerae_50_93_curated
precorrin-4 C11-methyltransferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

11788..12897
DNA (1110bp) protein (370aa)
Precorrin-4 C11-methyltransferase id=4042054 bin=GWF2_Lentisphaerae_50_93 species=Bilophila wadsworthia genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
precorrin-4 C11-methyltransferase Tax=GWF2_Lentisphaerae_50_93_curated
precorrin-4 C11-methyltransferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

12887..14278
DNA (1392bp) protein (464aa)
cobyrinic acid A,C-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=GWF2_Lentisphaerae_50_93_curated
Cobyrinic acid A,C-diamide synthase id=4042055 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
cobyrinic acid A,C-diamide synthase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14300..14536)
DNA (237bp) protein (79aa)
id=4042056 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4042056 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14582..15064)
DNA (483bp) protein (161aa)
uncharacterized LOC100793467 Tax=GWF2_Lentisphaerae_50_93_curated
Peptidyl-tRNA hydrolase domain protein id=4042057 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
class I peptide chain release factor
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15237..16181)
DNA (945bp) protein (315aa)
HPr kinase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=GWF2_Lentisphaerae_50_93_curated
HPr kinase/phosphorylase id=4042058 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
HPr kinase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16214..16555)
DNA (342bp) protein (114aa)
Sigma 54 modulation protein/ribosomal protein S30EA id=4042062 bin=GWF2_Lentisphaerae_50_93 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein Tax=GWF2_Lentisphaerae_50_93_curated
ribosomal subunit interface protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16628..17371)
DNA (744bp) protein (248aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=4042064 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=GWF2_Lentisphaerae_50_93_curated
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17434..18117)
DNA (684bp) protein (228aa)
OstA family protein id=4042068 bin=GWF2_Lentisphaerae_50_93 species=Methylobacterium extorquens genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
organic solvent tolerance OstA-like protein Tax=GWF2_Lentisphaerae_50_93_curated
organic solvent tolerance OstA-like protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18139..18639)
DNA (501bp) protein (167aa)
id=4042073 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4042073 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18606..19130)
DNA (525bp) protein (175aa)
Phosphatase kdsC id=4042074 bin=GWF2_Lentisphaerae_50_93 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
3-deoxy-8-phosphooctulonate synthase Tax=GWF2_Lentisphaerae_50_93_curated
3-deoxy-8-phosphooctulonate synthase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19105..19926)
DNA (822bp) protein (274aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=GWF2_Lentisphaerae_50_93_curated
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase id=4042076 bin=GWF2_Lentisphaerae_50_93 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_3292_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19999..20739)
DNA (741bp) protein (247aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=GWF2_Lentisphaerae_50_93_curated
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase id=4042080 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Displaying 20 items

View Taxonomy