ggKbase home page

GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

141..1040
DNA (900bp) protein (300aa)
Pirin domain protein id=4355501 bin=GWF2_Lentisphaerae_50_93 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
pirin domain-containing protein; K06911 Tax=GWF2_Lentisphaerae_50_93_curated
pirin domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1059..2051)
DNA (993bp) protein (331aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=4355503 bin=GWF2_Lentisphaerae_50_93 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
putative oxidoreductase Tax=GWF2_Lentisphaerae_50_93_curated
oxidoreductase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2154..2624)
DNA (471bp) protein (157aa)
Putative shikimate kinase id=4355506 bin=GWF2_Lentisphaerae_50_93 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2829..3803)
DNA (975bp) protein (325aa)
NADH:flavin oxidoreductase id=4355509 bin=GWF2_Lentisphaerae_50_93 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
NADH:flavin oxidoreductase Tax=GWF2_Lentisphaerae_50_93_curated
NADH:flavin oxidoreductase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4024..4758
DNA (735bp) protein (245aa)
putative PAS/PAC sensor protein Tax=GWF2_Lentisphaerae_50_93_curated
Putative PAS/PAC sensor protein id=4355510 bin=GWF2_Lentisphaerae_50_93 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
putative PAS/PAC sensor protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

5097..6554
DNA (1458bp) protein (486aa)
circadian clock protein KaiC (EC:2.7.11.1); K08482 circadian clock protein KaiC Tax=GWF2_Lentisphaerae_50_93_curated
circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC id=4355515 bin=GWF2_Lentisphaerae_50_93 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

6551..6835
DNA (285bp) protein (95aa)
KaiB-like protein 1 id=4355520 bin=GWF2_Lentisphaerae_50_93 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
KaiB domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
KaiB domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

6839..7177
DNA (339bp) protein (113aa)
KaiB domain protein id=4355521 bin=GWF2_Lentisphaerae_50_93 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
KaiB domain-containing protein; K08481 circadian clock protein KaiB Tax=GWF2_Lentisphaerae_50_93_curated
KaiB domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

7534..10332
DNA (2799bp) protein (933aa)
PAS domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
PAS/PAC sensor signal transduction histidine kinase id=4355522 bin=GWF2_Lentisphaerae_50_93 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PAS domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

10589..11524
DNA (936bp) protein (312aa)
PAS/PAC sensor signal transduction histidine kinase id=4355523 bin=GWF2_Lentisphaerae_50_93 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PAS/PAC sensor hybrid histidine kinase Tax=GWF2_Lentisphaerae_50_93_curated
PAS/PAC sensor hybrid histidine kinase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11572..12825)
DNA (1254bp) protein (418aa)
ppsA; phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=GWF2_Lentisphaerae_50_93_curated
ppsA; Phosphoenolpyruvate synthase (EC:2.7.9.2)
id=4355525 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(12847..15096)
DNA (2250bp) protein (750aa)
id=4355526 Tax=GWF2_Lentisphaerae_50_93_curated
id=4355526 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

15309..16697
DNA (1389bp) protein (463aa)
Putative uncharacterized protein id=4355527 bin=GWF2_Lentisphaerae_50_93 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17012..18979)
DNA (1968bp) protein (656aa)
id=4355528 Tax=GWF2_Lentisphaerae_50_93_curated
id=4355528 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19040..19639)
DNA (600bp) protein (200aa)
id=4355529 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4355529 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

20243..21049
DNA (807bp) protein (269aa)
Uncharacterized protein id=4355530 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

21129..22982
DNA (1854bp) protein (618aa)
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
Uncharacterized protein id=4355531 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

23140..23928
DNA (789bp) protein (263aa)
Transcriptional regulator, IclR family id=4355532 bin=GWF2_Lentisphaerae_50_93 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
IclR family transcriptional regulator Tax=GWF2_Lentisphaerae_50_93_curated
IclR family transcriptional regulator
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

24052..25374
DNA (1323bp) protein (441aa)
id=4355559 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4355559 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

25471..25851
DNA (381bp) protein (127aa)
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
Uncharacterized protein id=4355560 bin=GWF2_Lentisphaerae_50_93 species=Clostridium sp. ASF502 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_21
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

25974..26288
DNA (315bp) protein (105aa)
id=4355561 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4355561 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_22
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(26446..27327)
DNA (882bp) protein (294aa)
L-rhamnose operon transcriptional activator id=4355562 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus vortex genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
L-rhamnose operon transcriptional activator Tax=GWF2_Lentisphaerae_50_93_curated
L-rhamnose operon transcriptional activator
GWF2_Lentisphaerae_50_93_gwf2_scaffold_5866_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

27491..28912
DNA (1422bp) protein (474aa)
ADP-ribosylation/Crystallin J1 id=4355563 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus dendritiformis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
ADP-ribosylation/Crystallin J1 Tax=GWF2_Lentisphaerae_50_93_curated
crystallin
Displaying 23 items

View Taxonomy