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GWF2_OP3_43_52_gwf2_scaffold_2425

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_OP3_43_52_gwf2_scaffold_2425_1
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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288..1775
DNA (1488bp) protein (496aa)
Recombinase id=3833361 bin=GWF2_OP3_43_52 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
recombinase Tax=GWF2_WOR_2_43_52_curated
recombinase
GWF2_OP3_43_52_gwf2_scaffold_2425_trna_4
unknown

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comp(1722..1810)
DNA (89bp)
transferRNA
GWF2_OP3_43_52_gwf2_scaffold_2425_2
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(1873..2313)
DNA (441bp) protein (147aa)
cytidine/deoxycytidylate deaminase family protein, zinc-binding protein (EC:3.5.4.-) Tax=GWF2_WOR_2_43_52_curated
cytidine/deoxycytidylate deaminase family protein, zinc-binding protein (EC:3.5.4.-)
CMP/dCMP deaminase zinc-binding id=3833364 bin=GWF2_OP3_43_52 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_2425_trna_3
unknown

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comp(2369..2442)
DNA (74bp)
transferRNA
GWF2_OP3_43_52_gwf2_scaffold_2425_3
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(2618..3898)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein id=3833367 bin=GWF2_OP3_43_52 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_2425_4
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(4042..5379)
DNA (1338bp) protein (446aa)
Type II secretion system protein E id=3833370 bin=GWF2_OP3_43_52 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
gspE; type II secretion system protein E GspE; K07332 archaeal flagellar protein FlaI Tax=GWF2_WOR_2_43_52_curated
type II/IV secretion system ATPase
GWF2_OP3_43_52_gwf2_scaffold_2425_5
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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5752..8313
DNA (2562bp) protein (854aa)
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=GWF2_WOR_2_43_52_curated
DNA mismatch repair protein MutS id=3833398 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA mismatch repair protein MutS
GWF2_OP3_43_52_gwf2_scaffold_2425_6
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

8346..10100
DNA (1755bp) protein (585aa)
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=GWF2_WOR_2_43_52_curated
DNA mismatch repair protein MutL id=4744546 bin=GWC2_OP3_44_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
mutL; DNA mismatch repair protein
GWF2_OP3_43_52_gwf2_scaffold_2425_7
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(10127..12277)
DNA (2151bp) protein (717aa)
Cysteine protease id=3833404 bin=GWF2_OP3_43_52 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Kelch repeat type 1-containing protein Tax=GWF2_WOR_2_43_52_curated
Kelch repeat type 1-containing protein
GWF2_OP3_43_52_gwf2_scaffold_2425_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(12766..13587)
DNA (822bp) protein (274aa)
Stalked cell differentiation-controlling protein id=3833408 bin=GWF2_OP3_43_52 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
response regulator containing a CheY-like receiver domain and a GGDEF domain Tax=GWF2_WOR_2_43_52_curated
putative signaling protein
GWF2_OP3_43_52_gwf2_scaffold_2425_9
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(13879..14712)
DNA (834bp) protein (278aa)
Prophage antirepressor id=3833411 bin=GWF2_OP3_43_52 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
prophage antirepressor Tax=GWF2_WOR_2_43_52_curated
prophage antirepressor
GWF2_OP3_43_52_gwf2_scaffold_2425_trna_2
unknown

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comp(15328..15412)
DNA (85bp)
transferRNA
GWF2_OP3_43_52_gwf2_scaffold_2425_10
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

15702..16658
DNA (957bp) protein (319aa)
dusB; tRNA-dihydrouridine synthase (EC:1.-.-.-); K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] Tax=GWF2_WOR_2_43_52_curated
tRNA-dihydrouridine synthase id=3833416 bin=GWF2_OP3_43_52 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
dusB; tRNA-dihydrouridine synthase
GWF2_OP3_43_52_gwf2_scaffold_2425_11
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(16642..17451)
DNA (810bp) protein (270aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=GWF2_WOR_2_43_52_curated
Inositol-1-monophosphatase id=3833419 bin=GWF2_OP3_43_52 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
inositol monophosphatase
GWF2_OP3_43_52_gwf2_scaffold_2425_12
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(17760..18545)
DNA (786bp) protein (262aa)
Putative RNA methylase id=3833423 bin=GWF2_OP3_43_52 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
putative RNA methylase Tax=GWF2_WOR_2_43_52_curated
putative RNA methylase
GWF2_OP3_43_52_gwf2_scaffold_2425_13
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(18590..19132)
DNA (543bp) protein (181aa)
UPI0001D0900E related cluster id=2791514 bin=GWC2_OP3_44_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_2425_14
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(19168..20097)
DNA (930bp) protein (310aa)
DNA adenine methylase; K06223 DNA adenine methylase [EC:2.1.1.72] Tax=GWF2_WOR_2_43_52_curated
DNA adenine methylase id=3833432 bin=GWF2_OP3_43_52 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA adenine methylase
GWF2_OP3_43_52_gwf2_scaffold_2425_15
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(20723..21343)
DNA (621bp) protein (207aa)
id=3833438 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=3833438 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_2425_trna_1
unknown

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comp(21494..21580)
DNA (87bp)
transferRNA
GWF2_OP3_43_52_gwf2_scaffold_2425_16
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(21723..23015)
DNA (1293bp) protein (431aa)
Probable sensory transduction system regulatory protein id=2791501 bin=GWC2_OP3_44_8 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
sensory transduction system regulatory protein Tax=GWF2_WOR_2_43_52_curated
sensory transduction system regulatory protein
GWF2_OP3_43_52_gwf2_scaffold_2425_17
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(23113..23487)
DNA (375bp) protein (125aa)
id=3833443 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=3833443 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_2425_18
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(23500..23889)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=3833445 bin=GWF2_OP3_43_52 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_2425_19
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(23914..24417)
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=3833449 bin=GWF2_OP3_43_52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein; K09143 hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
Displaying 23 items

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