ggKbase home page

GWF2_OP3_43_52_gwf2_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 345 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_OP3_43_52_gwf2_scaffold_118_1
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

301..564
DNA (264bp) protein (88aa)
id=2880748 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=2880748 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_118_2
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

564..845
DNA (282bp) protein (94aa)
id=2880749 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=2880749 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_118_3
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

1100..1744
DNA (645bp) protein (215aa)
Multi-sensor hybrid histidine kinase id=2880750 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
multi-sensor hybrid histidine kinase Tax=GWF2_WOR_2_43_52_curated
multi-sensor hybrid histidine kinase
GWF2_OP3_43_52_gwf2_scaffold_118_4
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

2064..2282
DNA (219bp) protein (73aa)
id=2880752 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=2880752 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_118_5
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

2221..2586
DNA (366bp) protein (122aa)
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
Putative uncharacterized protein id=2880753 bin=GWF2_OP3_43_52 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_118_6
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

2704..8463
DNA (5760bp) protein (1920aa)
Chemotaxis sensory transducer Tax=GWF2_WOR_2_43_52_curated
Chemotaxis sensory transducer id=2880756 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_118_7
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

8554..8937
DNA (384bp) protein (128aa)
DNA-binding response regulator id=2880758 bin=GWF2_OP3_43_52 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA-binding response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=GWF2_WOR_2_43_52_curated
DNA-binding response regulator
GWF2_OP3_43_52_gwf2_scaffold_118_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

9094..9366
DNA (273bp) protein (91aa)
id=2880760 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=2880760 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_118_9
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

9395..9763
DNA (369bp) protein (123aa)
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP id=2880761 bin=GWF2_OP3_43_52 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP Tax=GWF2_WOR_2_43_52_curated
phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP
GWF2_OP3_43_52_gwf2_scaffold_118_10
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

9823..10752
DNA (930bp) protein (310aa)
Uncharacterized protein id=2880763 bin=GWF2_OP3_43_52 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_118_11
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

10754..11884
DNA (1131bp) protein (377aa)
UPI00020A97CE related cluster id=2880765 bin=GWF2_OP3_43_52 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWF2_WOR_2_43_52_curated
extracellular ligand-binding receptor
GWF2_OP3_43_52_gwf2_scaffold_118_12
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

11884..12789
DNA (906bp) protein (302aa)
High-affinity branched-chain amino acid ABC transporter (Permease protein) id=2880767 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
livH; high-affinity branched-chain amino acid ABC transporter permease Tax=GWF2_WOR_2_43_52_curated
livH; high-affinity branched-chain amino acid ABC transporter permease
GWF2_OP3_43_52_gwf2_scaffold_118_13
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

12782..13822
DNA (1041bp) protein (347aa)
Inner-membrane translocator id=2880769 bin=GWF2_OP3_43_52 species=Marinobacter algicola genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
braE; high-affinity branched-chain amino acid transport system permease BraE Tax=GWF2_WOR_2_43_52_curated
braE; high-affinity branched-chain amino acid transport system permease BraE
GWF2_OP3_43_52_gwf2_scaffold_118_14
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

13819..14589
DNA (771bp) protein (257aa)
ABC-type branched-chain amino acid transport systems, ATPase component id=2880771 bin=GWF2_OP3_43_52 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWF2_WOR_2_43_52_curated
branched-chain amino acid ABC transporter ATPase
GWF2_OP3_43_52_gwf2_scaffold_118_15
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

14919..15626
DNA (708bp) protein (236aa)
ABC transporter related protein id=2880773 bin=GWF2_OP3_43_52 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWF2_WOR_2_43_52_curated
ABC transporter-like protein
GWF2_OP3_43_52_gwf2_scaffold_118_16
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

15769..18042
DNA (2274bp) protein (758aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=GWF2_WOR_2_43_52_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=2880775 bin=GWF2_OP3_43_52 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_118_17
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

18111..19793
DNA (1683bp) protein (561aa)
cstA; Carbon starvation protein A Tax=GWF2_WOR_2_43_52_curated
Carbon starvation protein A id=2880777 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cstA; Carbon starvation protein A
GWF2_OP3_43_52_gwf2_scaffold_118_18
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

19812..20459
DNA (648bp) protein (216aa)
DedA family protein id=2880779 bin=GWF2_OP3_43_52 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
dedA family protein; K03975 membrane-associated protein Tax=GWF2_WOR_2_43_52_curated
dedA family protein
GWF2_OP3_43_52_gwf2_scaffold_118_19
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

20531..21166
DNA (636bp) protein (212aa)
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB Tax=GWF2_WOR_2_43_52_curated
MotA/TolQ/ExbB proton channel id=2880951 bin=GWF2_OP3_43_52 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
MotA/TolQ/ExbB proton channel
GWF2_OP3_43_52_gwf2_scaffold_118_20
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

21171..21587
DNA (417bp) protein (139aa)
ExbD/TolR family transport energizing protein id=2880958 bin=GWF2_OP3_43_52 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ExbD/TolR family transport energizing protein Tax=GWF2_WOR_2_43_52_curated
ExbD/TolR family transport energizing protein
GWF2_OP3_43_52_gwf2_scaffold_118_21
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

21764..23635
DNA (1872bp) protein (624aa)
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
Glycosyl hydrolases family 2, TIM barrel domain, putative id=2880962 bin=GWF2_OP3_43_52 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_118_22
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

24189..24785
DNA (597bp) protein (199aa)
alpha-ribazole phosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=GWF2_WOR_2_43_52_curated
Alpha-ribazole phosphatase id=2880967 bin=GWF2_OP3_43_52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
alpha-ribazole phosphatase
GWF2_OP3_43_52_gwf2_scaffold_118_23
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

24850..25374
DNA (525bp) protein (175aa)
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=GWF2_WOR_2_43_52_curated
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase id=2880970 bin=GWF2_OP3_43_52 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_118_24
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

25421..26476
DNA (1056bp) protein (352aa)
nicotinate-nucleotide/dimethylbenzimidazolephosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=GWF2_WOR_2_43_52_curated
nicotinate-nucleotide/dimethylbenzimidazolephosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase id=3877252 bin=GWC2_OP3_44_8 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
GWF2_OP3_43_52_gwf2_scaffold_118_25
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

26620..27351
DNA (732bp) protein (244aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=GWF2_WOR_2_43_52_curated
Cobalamin synthase id=2880976 bin=GWF2_OP3_43_52 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cobalamin 5'-phosphate synthase
GWF2_OP3_43_52_gwf2_scaffold_118_26
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

27383..28450
DNA (1068bp) protein (356aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase id=2880979 bin=GWF2_OP3_43_52 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Tax=GWF2_WOR_2_43_52_curated
HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
GWF2_OP3_43_52_gwf2_scaffold_118_27
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

28461..30056
DNA (1596bp) protein (532aa)
cobyric acid synthase CobQ; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=GWF2_WOR_2_43_52_curated
Cobyric acid synthase id=2880982 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cobyric acid synthase CobQ
GWF2_OP3_43_52_gwf2_scaffold_118_28
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

30131..31090
DNA (960bp) protein (320aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] Tax=GWF2_WOR_2_43_52_curated
Cobalamin biosynthesis protein CobD id=2880984 bin=GWF2_OP3_43_52 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cobalamin biosynthesis protein CobD
GWF2_OP3_43_52_gwf2_scaffold_118_29
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

31214..31372
DNA (159bp) protein (53aa)
id=2880987 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
id=2880987 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_118_30
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

31501..32853
DNA (1353bp) protein (451aa)
Radical SAM additional 4Fe4S-binding domain protein id=2880988 bin=GWF2_OP3_43_52 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
radical SAM additional 4Fe4S-binding domain protein Tax=GWF2_WOR_2_43_52_curated
radical SAM additional 4Fe4S-binding domain protein
Displaying items 1-30 of 345 in total

View Taxonomy