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GWF2_RBX1_38_17_gwf2_scaffold_13408

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_13408_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1..153
DNA (153bp) protein (51aa)
Integrase catalytic subunit id=1980856 bin=GWE2_RBX1_39_32 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Integrase catalytic subunit Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_13408_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(301..582)
DNA (282bp) protein (94aa)
TnAtcArs resolvase id=2097708 bin=GWD2_RBX1-related_39_127 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
TnAtcArs resolvase Tax=GWF2_RBX1_38_17_curated
tnpR; Transposon Tn21 resolvase
GWF2_RBX1_38_17_gwf2_scaffold_13408_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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769..1575
DNA (807bp) protein (269aa)
id=1980862 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980862 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_13408_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2219..2869)
DNA (651bp) protein (217aa)
Putative uncharacterized protein id=2097711 bin=GWD2_RBX1-related_39_127 species=Serpula lacrymans genus=Serpula taxon_order=Boletales taxon_class=Agaricomycetes phylum=Basidiomycota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_13408_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3023..3241)
DNA (219bp) protein (73aa)
id=24611038 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24611038 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_13408_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3231..3800)
DNA (570bp) protein (190aa)
id=1980866 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980866 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_13408_trna_1
unknown

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4042..4114
DNA (73bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_13408_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4180..4590)
DNA (411bp) protein (137aa)
id=1980867 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980867 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_13408_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4605..4940)
DNA (336bp) protein (112aa)
id=1980869 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980869 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_13408_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4931..5515)
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, RpoE id=1980870 bin=GWE2_RBX1_39_32 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_RBX1_38_17_curated
ECF subfamily RNA polymerase sigma-24 factor
GWF2_RBX1_38_17_gwf2_scaffold_13408_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5930..6727
DNA (798bp) protein (266aa)
id=1980876 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980876 Tax=GWF2_RBX1_38_17_curated
Displaying 11 items

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