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GWF2_RBX1_38_17_gwf2_scaffold_2487

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_2487_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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162..500
DNA (339bp) protein (113aa)
id=2171258 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171258 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(632..1207)
DNA (576bp) protein (192aa)
Chemotaxis protein CheW id=1897309 bin=GWD2_RBX1-related_39_127 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
cheW1; chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=GWF2_RBX1_38_17_curated
cheW1; chemotaxis protein CheW
GWF2_RBX1_38_17_gwf2_scaffold_2487_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1280..2218)
DNA (939bp) protein (313aa)
Alpha/beta hydrolase fold protein id=2171261 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
alpha/beta hydrolase fold protein Tax=GWF2_RBX1_38_17_curated
alpha/beta hydrolase fold protein
GWF2_RBX1_38_17_gwf2_scaffold_2487_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2250..2639)
DNA (390bp) protein (130aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=GWF2_RBX1_38_17_curated
NADPH-dependent 7-cyano-7-deazaguanine reductase id=3850843 bin=GWF2_OP9-related_38_17 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
7-cyano-7-deazaguanine reductase
GWF2_RBX1_38_17_gwf2_scaffold_2487_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2796..3524
DNA (729bp) protein (243aa)
Tetratricopeptide TPR_2 repeat protein id=2171265 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Tetratricopeptide TPR_2 repeat protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3521..4549)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein id=2171266 bin=GWE2_RBX1_39_32 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2487_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4711..5322
DNA (612bp) protein (204aa)
Putative uncharacterized protein id=2171267 bin=GWE2_RBX1_39_32 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2487_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5476..6303
DNA (828bp) protein (276aa)
id=2171268 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171268 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(6296..6439)
DNA (144bp) protein (48aa)
id=2171269 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171269 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6694..8217
DNA (1524bp) protein (508aa)
pectate lyase id=2171270 bin=GWE2_RBX1_39_32 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
pectinesterase Tax=GWF2_RBX1_38_17_curated
pectinesterase
GWF2_RBX1_38_17_gwf2_scaffold_2487_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8473..9549
DNA (1077bp) protein (359aa)
Putative uncharacterized protein id=2171271 bin=GWE2_RBX1_39_32 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2487_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(9596..10489)
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=3850860 bin=GWF2_OP9-related_38_17 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
protein of unknown function DUF6 transmembrane Tax=GWF2_RBX1_38_17_curated
permease
GWF2_RBX1_38_17_gwf2_scaffold_2487_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(10669..11481)
DNA (813bp) protein (271aa)
dinucleotide-utilizing protein Tax=GWF2_RBX1_38_17_curated
dinucleotide-utilizing protein id=24609993 bin=RAAC11 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RAAC11 organism_group=Unknown_CP
dinucleotide-utilizing protein
GWF2_RBX1_38_17_gwf2_scaffold_2487_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11432..12217)
DNA (786bp) protein (262aa)
TatD related DNase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=GWF2_RBX1_38_17_curated
At5g17570 id=2171274 bin=GWE2_RBX1_39_32 species=unknown genus=Arabidopsis taxon_order=Brassicales taxon_class=unknown phylum=Streptophyta tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TatD family hydrolase
GWF2_RBX1_38_17_gwf2_scaffold_2487_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12235..13428)
DNA (1194bp) protein (398aa)
designed protein CTPR3 id=3850867 bin=GWF2_OP9-related_38_17 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
O-linked GlcNAc transferase Tax=GWF2_RBX1_38_17_curated
O-linked GlcNAc transferase
GWF2_RBX1_38_17_gwf2_scaffold_2487_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13747..14478)
DNA (732bp) protein (244aa)
id=2171276 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171276 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14602..16266)
DNA (1665bp) protein (555aa)
AAEL014668-PA (Fragment) id=1897238 bin=GWD2_RBX1-related_39_127 species=Aedes aegypti genus=Aedes taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ankyrin 2,3/unc44; K15503 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B Tax=GWF2_RBX1_38_17_curated
ankyrin 2,3/unc44; K15503 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
GWF2_RBX1_38_17_gwf2_scaffold_2487_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16473..17120)
DNA (648bp) protein (216aa)
id=2171278 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171278 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17202..17405)
DNA (204bp) protein (68aa)
id=2171279 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171279 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17468..21865
DNA (4398bp) protein (1466aa)
CoA-substrate-specific enzyme activase, putative id=24609986 bin=RAAC11 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
CoA-substrate-specific enzyme activase, putative Tax=GWF2_RBX1_38_17_curated
CoA-substrate-specific enzyme activase, putative
GWF2_RBX1_38_17_gwf2_scaffold_2487_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21990..22886)
DNA (897bp) protein (299aa)
High-affinity nickel-transporter id=2171281 bin=GWE2_RBX1_39_32 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
high-affinity nickel-transporter Tax=GWF2_RBX1_38_17_curated
high-affinity nickel-transporter
GWF2_RBX1_38_17_gwf2_scaffold_2487_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22883..23476)
DNA (594bp) protein (198aa)
ABC-type uncharacterized transport system periplasmic component-like protein id=2171282 bin=GWE2_RBX1_39_32 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter periplasmic protein Tax=GWF2_RBX1_38_17_curated
ABC transporter periplasmic protein
GWF2_RBX1_38_17_gwf2_scaffold_2487_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23688..24488)
DNA (801bp) protein (267aa)
id=3850956 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=3850956 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2487_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24506..24658)
DNA (153bp) protein (51aa)
id=2171285 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171285 Tax=GWF2_RBX1_38_17_curated
Displaying 24 items

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