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GWF2_RBX1_38_17_gwf2_scaffold_463

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_463_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(18..599)
DNA (582bp) protein (194aa)
Phage integrase id=1924054 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phage integrase family protein Tax=GWF2_RBX1_38_17_curated
phage integrase family protein
GWF2_RBX1_38_17_gwf2_scaffold_463_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

942..3659
DNA (2718bp) protein (906aa)
sensory box histidine kinase Tax=GWF2_RBX1_38_17_curated
Sensory box histidine kinase id=4216622 bin=GWF2_OP9-related_38_17 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
sensory box histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_463_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4130..4333
DNA (204bp) protein (68aa)
Putative cold-shock DNA-binding domain protein id=1924041 bin=GWE2_RBX1_39_32 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cspC; cold shock-like protein cspC; K03704 cold shock protein (beta-ribbon, CspA family) Tax=GWF2_RBX1_38_17_curated
cold-shock protein
GWF2_RBX1_38_17_gwf2_scaffold_463_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4778..5725
DNA (948bp) protein (316aa)
N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWF2_RBX1_38_17_curated
N-acetyl-gamma-glutamyl-phosphate reductase id=1924036 bin=GWE2_RBX1_39_32 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
N-acetyl-gamma-glutamyl-phosphate reductase
GWF2_RBX1_38_17_gwf2_scaffold_463_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5871..6206)
DNA (336bp) protein (112aa)
id=1924035 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1924035 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_463_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6486..8936)
DNA (2451bp) protein (817aa)
Methyl-accepting chemotaxis sensory transducer id=4216626 bin=GWF2_OP9-related_38_17 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWF2_RBX1_38_17_gwf2_scaffold_463_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9155..9331)
DNA (177bp) protein (59aa)
id=24610109 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610109 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_463_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9736..10611)
DNA (876bp) protein (292aa)
Leucine-rich repeat protein id=1993210 bin=GWE2_RBX1_39_32 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
leucine-rich repeat protein Tax=GWF2_RBX1_38_17_curated
leucine-rich repeat protein
GWF2_RBX1_38_17_gwf2_scaffold_463_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10886..11749
DNA (864bp) protein (288aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=GWF2_RBX1_38_17_curated
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 id=1993249 bin=GWE2_RBX1_39_32 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_463_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11998..14016)
DNA (2019bp) protein (673aa)
methyl-accepting chemotaxis sensory transducer with Cache sensor; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
Methyl-accepting chemotaxis sensory transducer with Cache sensor id=2063664 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methyl-accepting chemotaxis sensory transducer with Cache sensor
GWF2_RBX1_38_17_gwf2_scaffold_463_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14352..16589
DNA (2238bp) protein (746aa)
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein id=24610113 bin=RAAC11 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
methyl-accepting chemotaxis sensory transducer
GWF2_RBX1_38_17_gwf2_scaffold_463_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16826..17155
DNA (330bp) protein (110aa)
Regulatory protein ArsR id=1993252 bin=GWE2_RBX1_39_32 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
regulatory protein ArsR Tax=GWF2_RBX1_38_17_curated
regulatory protein ArsR
GWF2_RBX1_38_17_gwf2_scaffold_463_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17191..18141
DNA (951bp) protein (317aa)
Permease id=1993253 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
permease; K07089 Tax=GWF2_RBX1_38_17_curated
permease
GWF2_RBX1_38_17_gwf2_scaffold_463_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18168..18401
DNA (234bp) protein (78aa)
Redox-active disulfide protein 2 id=2063650 bin=GWD2_RBX1-related_39_127 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
redox-active disulfide protein 2 Tax=GWF2_RBX1_38_17_curated
redox-active disulfide protein 2
GWF2_RBX1_38_17_gwf2_scaffold_463_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18424..18834
DNA (411bp) protein (137aa)
DGC domain protein id=1993255 bin=GWE2_RBX1_39_32 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DGC domain-containing protein Tax=GWF2_RBX1_38_17_curated
DGC domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_463_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18834..19253
DNA (420bp) protein (140aa)
Thioredoxin domain protein id=4216687 bin=GWF2_OP9-related_38_17 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
trxA; Thioredoxin domain protein; K03671 thioredoxin 1 Tax=GWF2_RBX1_38_17_curated
trxA; thioredoxin domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_463_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19255..19953
DNA (699bp) protein (233aa)
Cytochrome c biogenesis protein id=2063632 bin=GWD2_RBX1-related_39_127 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ccdA; Cytochrome c biogenesis protein; K06196 cytochrome c-type biogenesis protein Tax=GWF2_RBX1_38_17_curated
ccdA; cytochrome c biogenesis protein
GWF2_RBX1_38_17_gwf2_scaffold_463_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20132..20494
DNA (363bp) protein (121aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis protein id=1993258 bin=GWE2_RBX1_39_32 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_463_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20508..21083
DNA (576bp) protein (192aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4216690 bin=GWF2_OP9-related_38_17 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
methylase involved in ubiquinone/menaquinone biosynthesis Tax=GWF2_RBX1_38_17_curated
methylase involved in ubiquinone/menaquinone biosynthesis
GWF2_RBX1_38_17_gwf2_scaffold_463_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21263..21712)
DNA (450bp) protein (150aa)
Rhodanese-like protein id=4216691 bin=GWF2_OP9-related_38_17 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
rhodanese-related sulfurtransferase Tax=GWF2_RBX1_38_17_curated
rhodanese-related sulfurtransferase
GWF2_RBX1_38_17_gwf2_scaffold_463_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21780..22979)
DNA (1200bp) protein (400aa)
chromate ion transporter family chromate transporter; K07240 chromate transporter id=24610123 bin=RAAC11 species=Dehalobacter sp. FTH1 genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
chromate ion transporter family chromate transporter; K07240 chromate transporter Tax=GWF2_RBX1_38_17_curated
chromate ion transporter family chromate transporter
GWF2_RBX1_38_17_gwf2_scaffold_463_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22992..23177)
DNA (186bp) protein (62aa)
Putative uncharacterized protein id=1993262 bin=GWE2_RBX1_39_32 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_463_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23613..25061
DNA (1449bp) protein (483aa)
hypothetical protein id=24610125 bin=RAAC11 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_463_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25058..25897
DNA (840bp) protein (280aa)
hypothetical protein VspiD_11005 id=1993264 bin=GWE2_RBX1_39_32 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
xylose isomerase Tax=GWF2_RBX1_38_17_curated
xylose isomerase
GWF2_RBX1_38_17_gwf2_scaffold_463_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25880..27016)
DNA (1137bp) protein (379aa)
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) id=4216696 bin=GWF2_OP9-related_38_17 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Tax=GWF2_RBX1_38_17_curated
putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
GWF2_RBX1_38_17_gwf2_scaffold_463_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27340..27627
DNA (288bp) protein (96aa)
Putative uncharacterized protein id=1993266 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_463_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27831..28328
DNA (498bp) protein (166aa)
id=1993267 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1993267 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_463_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(28436..28846)
DNA (411bp) protein (137aa)
id=1993268 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1993268 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_463_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(28959..29693)
DNA (735bp) protein (245aa)
Family 3 extracellular solute-binding protein id=1993269 bin=GWE2_RBX1_39_32 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
family 3 extracellular solute-binding protein Tax=GWF2_RBX1_38_17_curated
family 3 extracellular solute-binding protein
GWF2_RBX1_38_17_gwf2_scaffold_463_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30112..30888)
DNA (777bp) protein (259aa)
id=4216701 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=4216701 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 88 in total

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