ggKbase home page

RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_1
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1..99)
-----------------
DNA (99bp)
protein (33aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_2
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(871..1287)
-----------------
DNA (417bp)
protein (139aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_3
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1657..1929)
-----------------
DNA (273bp)
protein (91aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_4
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2259..2447
-----------------
DNA (189bp)
protein (63aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_5
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2869..3234
-----------------
DNA (366bp)
protein (122aa)
Endonuclease V; K05982 deoxyribonuclease V [EC:3.1.21.7] Tax=RBG_16_Actinobacteria_70_17_curated
Endonuclease V (EC:3.1.21.7)
Deoxyribonuclease V n=1 Tax=uncultured prokaryote RepID=H5SPM0_9ZZZZ
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_6
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3986..4231)
-----------------
DNA (246bp)
protein (82aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_7
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4922..5173
-----------------
DNA (252bp)
protein (84aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_8
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6381..6620
-----------------
DNA (240bp)
protein (80aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_9
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6728..7219
-----------------
DNA (492bp)
protein (164aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_10
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7427..7909)
-----------------
DNA (483bp)
protein (161aa)
Regulatory P domain of subtilisin-like proprotein convertases n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRG7_AEQSU
regulatory P domain of subtilisin-like proprotein convertases Tax=RBG_16_Actinobacteria_70_17_curated
regulatory P domain of subtilisin-like proprotein convertases
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_11
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

8514..8714
-----------------
DNA (201bp)
protein (67aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_12
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9514..10449)
-----------------
DNA (936bp)
protein (312aa)
magnesium transporter protein; K03284 magnesium transporter Tax=RBG_16_Actinobacteria_70_17_curated
Magnesium transporter protein id=2294936 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
magnesium transporter protein
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_13
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10719..11486)
-----------------
DNA (768bp)
protein (256aa)
glutamine-dependent NAD(+) synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RBG_16_Actinobacteria_70_17_curated
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=24542944 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
NAD synthetase
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_14
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11880..12023
-----------------
DNA (144bp)
protein (48aa)
Tax=RBG_16_Actinobacteria_70_17_curated
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_15
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12459..13871)
-----------------
DNA (1413bp)
protein (471aa)
baeS; two-component system histidine kinase Tax=RBG_16_Actinobacteria_70_17_curated
two-component system histidine kinase id=24542945 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Amycolatopsis balhimycina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
two-component system histidine kinase
RBG_16_Actinobacteria_70_17_RBG_16_scaffold_84502_16
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(13874..14119)
-----------------
DNA (246bp)
protein (82aa)
hypothetical protein Tax=RBG_16_Actinobacteria_70_17_curated
OmpR family two-component response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=24542946 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
transcriptional regulator
Displaying 16 items

View Taxonomy