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RBG_16_DPX2_64_85_RBG_16_scaffold_8100

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RBG_16_Deltaproteobacteria_64_85_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI00034A901A
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(989..2026)
DNA (1038bp) protein (346aa)
lipopolysaccharide heptosyltransferase I; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
lipopolysaccharide heptosyltransferase I; K02841 heptosyltransferase I [EC:2.4.-.-] id=14623869 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
ADP-heptose--lipopolysaccharide heptosyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2046..3101)
DNA (1056bp) protein (352aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] id=14623868 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
ADP-heptose--LPS heptosyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3126..4220)
DNA (1095bp) protein (365aa)
DegT/DnrJ/EryC1/StrS aminotransferase; K13017 UDP-3-keto-D-GlcNAcA aminotransferase [EC:2.6.1.-] id=14623867 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RBG_16_Deltaproteobacteria_64_85_curated
DegT/DnrJ/EryC1/StrS aminotransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_trna_1
unknown

Not on your lists

4359..4443
DNA (85bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_trna_2
unknown

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4510..4599
DNA (90bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_trna_3
unknown

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4672..4762
DNA (91bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_trna_4
unknown

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4993..5082
DNA (90bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_trna_5
unknown

Not on your lists

5155..5245
DNA (91bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5735..6247
DNA (513bp) protein (171aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Lipoprotein, putative id=4005034 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6298..7104)
DNA (807bp) protein (269aa)
myo-inositol-1(or 4)-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RBG_16_Deltaproteobacteria_64_85_curated
myo-inositol-1(or 4)-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=14623865 bin=bin5_DeltaP species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
myo-inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7184..7342
DNA (159bp) protein (53aa)
id=14623864 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14623864 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7420..7839
DNA (420bp) protein (140aa)
nickel responsive regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative nickel-responsive regulator id=2633889 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
nickel-responsive regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7979..8677
DNA (699bp) protein (233aa)
cobalt transport protein CbiM; K02007 cobalt/nickel transport system permease protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
cobalt transport protein CbiM; K02007 cobalt/nickel transport system permease protein id=14623863 bin=bin5_DeltaP species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
cobalt transport protein CbiM
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8674..9045
DNA (372bp) protein (124aa)
cobalamin biosynthesis protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
cobalamin biosynthesis protein id=14623862 bin=bin5_DeltaP species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin5_DeltaP organism_group=Deltaproteobacteria
cobalamin biosynthesis protein
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9036..9953
DNA (918bp) protein (306aa)
cbiQ-3; putative ABC-type cobalt transport system, permease protein CbiQ; K02008 cobalt/nickel transport system permease protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
cobalt ABC transporter, inner membrane subunit CbiQ; K02008 cobalt/nickel transport system permease protein id=14623861 bin=bin5_DeltaP species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
cbiQ-3; ABC-type cobalt transport system, permease protein CbiQ
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9955..10854
DNA (900bp) protein (300aa)
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
ABC transporter ATP-binding protein; K02006 cobalt/nickel transport system ATP-binding protein id=14623860 bin=bin5_DeltaP species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
ABC transporter
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10851..12173
DNA (1323bp) protein (441aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14623859 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12184..13479)
DNA (1296bp) protein (432aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=RBG_16_Deltaproteobacteria_64_85_curated
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase id=1718181 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_8100_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13720..13851
DNA (132bp) protein (44aa)
Cupin 2 conserved barrel domain protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Cupin 2 conserved barrel domain protein id=2633619 bin=GWC2_Proteo_65_14_Ab886 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Displaying 20 items

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