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RBG_16_DPX2_64_85_RBG_16_scaffold_937

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_937_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1370)
DNA (1368bp) protein (456aa)
DNA repair protein RadA (EC:2.1.1.63); K04485 DNA repair protein RadA/Sms Tax=RBG_16_Deltaproteobacteria_64_85_curated
DNA repair protein RadA (EC:2.1.1.63); K04485 DNA repair protein RadA/Sms id=14624106 bin=bin5_DeltaP species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
DNA repair protein RadA (EC:2.1.1.63)
RBG_16_DPX2_64_85_RBG_16_scaffold_937_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1358..2533)
DNA (1176bp) protein (392aa)
hypothetical protein; K09121 hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K09121 hypothetical protein id=14624107 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_937_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2554..3303)
DNA (750bp) protein (250aa)
hypothetical protein; K06898 Tax=RBG_16_Deltaproteobacteria_64_85_curated
NCAIR mutase (PurE)-related protein-like protein id=4131302 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_937_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3300..4586)
DNA (1287bp) protein (429aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624142 bin=bin5_DeltaP species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
conserved membrane protein of unknown function
RBG_16_DPX2_64_85_RBG_16_scaffold_937_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4590..5840)
DNA (1251bp) protein (417aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624143 bin=bin5_DeltaP species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_937_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5846..6871)
DNA (1026bp) protein (342aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Thiamine-monophosphate kinase id=4131296 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
thiamine-monophosphate kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_937_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6868..9381)
DNA (2514bp) protein (838aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=14624144 bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
ATP-dependent proteinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
ATP-dependent proteinase
RBG_16_DPX2_64_85_RBG_16_scaffold_937_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9413..9853)
DNA (441bp) protein (147aa)
Heat shock protein Hsp20 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Molecular chaperone id=4131292 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
molecular chaperone
RBG_16_DPX2_64_85_RBG_16_scaffold_937_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9850..10716)
DNA (867bp) protein (289aa)
galU; glucose-1-phosphate uridylyltransferase (EC:2.7.7.9) Tax=RBG_16_Deltaproteobacteria_64_85_curated
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=14624146 bin=bin5_DeltaP species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin5_DeltaP organism_group=Deltaproteobacteria
galU; glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
RBG_16_DPX2_64_85_RBG_16_scaffold_937_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10713..12731)
DNA (2019bp) protein (673aa)
putative ATP-dependent helicase; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RBG_16_Deltaproteobacteria_64_85_curated
putative ATP-dependent helicase; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] id=14624147 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative ATP-dependent helicase
RBG_16_DPX2_64_85_RBG_16_scaffold_937_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12732..14666)
DNA (1935bp) protein (645aa)
putative ABC-type branched-chain amino acid transport systems, periplasmic component
ABC-type branched-chain amino acid binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
ABC-type branched-chain amino acid binding protein id=14624148 bin=bin5_DeltaP species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_937_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14666..15772)
DNA (1107bp) protein (369aa)
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RBG_16_Deltaproteobacteria_64_85_curated
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=14624149 bin=bin5_DeltaP species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
molecular chaperone DnaJ
RBG_16_DPX2_64_85_RBG_16_scaffold_937_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15774..16382)
DNA (609bp) protein (203aa)
grpE; heat shock protein nucleotide exchange factor GrpE; K03687 molecular chaperone GrpE Tax=RBG_16_Deltaproteobacteria_64_85_curated
GrpE protein; K03687 molecular chaperone GrpE id=14624150 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
grpE; DnaJ adenine nucleotide exchange factor GrpE
RBG_16_DPX2_64_85_RBG_16_scaffold_937_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16442..17485)
DNA (1044bp) protein (348aa)
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RBG_16_Deltaproteobacteria_64_85_curated
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=14624151 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
heat-inducible transcription repressor HrcA
RBG_16_DPX2_64_85_RBG_16_scaffold_937_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17588..18478)
DNA (891bp) protein (297aa)
hypothetical protein; K04070 putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Radical SAM domain protein id=3890967 bin=GWA2_Deltaproteo_65_63 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_937_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18555..21194)
DNA (2640bp) protein (880aa)
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
PAS/PAC sensor hybrid histidine kinase id=3414283 bin=GWC2_Deltaproteobacteria_66_88 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
PAS/PAC sensor hybrid histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_937_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21366..22586
DNA (1221bp) protein (407aa)
diguanylate cyclase; K13590 diguanylate cyclase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Diguanylate cyclase id=4555822 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
diguanylate cyclase
RBG_16_DPX2_64_85_RBG_16_scaffold_937_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22715..23743
DNA (1029bp) protein (343aa)
extracellular solute-binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
TRAP proton/solute symporter, periplasmic substrate-binding protein id=4722212 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
TRAP proton/solute symporter, periplasmic substrate-binding protein
RBG_16_DPX2_64_85_RBG_16_scaffold_937_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23756..24241
DNA (486bp) protein (162aa)
TRAP transporter small membrane protein component Tax=RBG_16_Deltaproteobacteria_64_85_curated
TRAP transporter small membrane protein component, putative id=4091046 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
TRAP transporter small membrane protein component
RBG_16_DPX2_64_85_RBG_16_scaffold_937_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24238..25542
DNA (1305bp) protein (435aa)
TRAP transporter, large membrane protein component Tax=RBG_16_Deltaproteobacteria_64_85_curated
TRAP transporter, large membrane protein component id=4722216 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
TRAP transporter large membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_937_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25559..27394
DNA (1836bp) protein (612aa)
indolepyruvate ferredoxin oxidoreductase subunit alpha; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Indolepyruvate:ferredoxin oxidoreductase, alpha subunit id=4091049 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
iorA-2; indolepyruvate:ferredoxin oxidoreductase subunit alpha rbh
RBG_16_DPX2_64_85_RBG_16_scaffold_937_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27391..27975
DNA (585bp) protein (195aa)
iorB-2; indolepyruvate ferredoxin oxidoreductase subunit beta; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Indolepyruvate:ferredoxin oxidoreductase, beta subunit id=4091050 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
iorB-2; indolepyruvate:ferredoxin oxidoreductase subunit beta
RBG_16_DPX2_64_85_RBG_16_scaffold_937_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27987..29279
DNA (1293bp) protein (431aa)
paaK-3; phenylacetate--coenzyme A ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Phenylacetate--coenzyme A ligase id=4091051 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
paaK-3; phenylacetate--coenzyme A ligase
RBG_16_DPX2_64_85_RBG_16_scaffold_937_24
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29317..29445
DNA (129bp) protein (43aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Deltaproteobacteria_64_85_curated
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=14624246 bin=bin5_DeltaP species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_937_25
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29511..29624
DNA (114bp) protein (38aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
Displaying 25 items

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