ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_505

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_505_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..599)
DNA (597bp) protein (199aa)
putative phosphate regulon transcriptional regulatory protein PhoB; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RBG_16_Deltaproteobacteria_64_8
putative winged helix family wo component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=14624869 bin=bin5_DeltaP species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative phosphate regulon transcriptional regulatory protein PhoB
RBG_16_DPX2_64_85_RBG_16_scaffold_505_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(807..1988)
DNA (1182bp) protein (394aa)
alkaline phosphatase (EC:3.1.3.1); K01077 alkaline phosphatase [EC:3.1.3.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5J3_GEOUR
RBG_16_DPX2_64_85_RBG_16_scaffold_505_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1985..2908)
DNA (924bp) protein (308aa)
sphingosine kinase and DAGKc-like kinase; K07029 Tax=RBG_16_Deltaproteobacteria_64_85_curated
conserved protein of unknown function; diacylglycerol kinase catalytic domain id=14624868 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin5_DeltaP organism_group=Deltaproteobacteria
sphingosine/diacylglycerol kinase-like protein
RBG_16_DPX2_64_85_RBG_16_scaffold_505_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2958..3140)
DNA (183bp) protein (61aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_505_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3208..3396)
DNA (189bp) protein (63aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14623479 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_505_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3405..3527)
DNA (123bp) protein (41aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_505_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3935..4678
DNA (744bp) protein (248aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RBG_16_Deltaproteobacteria_64_85_curated
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] id=14624867 bin=bin5_DeltaP species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
glycerophosphoryl diester phosphodiesterase
RBG_16_DPX2_64_85_RBG_16_scaffold_505_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4888..5856)
DNA (969bp) protein (323aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=14624866 bin=bin5_DeltaP species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
thioredoxin reductase Tax=RBG_16_Deltaproteobacteria_64_85_curated
thioredoxin reductase
RBG_16_DPX2_64_85_RBG_16_scaffold_505_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5964..7013
DNA (1050bp) protein (350aa)
putative 2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Enoyl-[acyl carrier protein] reductase II id=2476449 bin=GWC2_Deltaproteobacteria_66_88 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Putative 2-nitropropane dioxygenase family protein
RBG_16_DPX2_64_85_RBG_16_scaffold_505_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7065..7694
DNA (630bp) protein (210aa)
hypothetical protein; K07220 hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein id=4895522 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
phosphate transport regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_505_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7687..8694
DNA (1008bp) protein (336aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=RBG_16_Deltaproteobacteria_64_85_curated
phosphate transporter; K03306 inorganic phosphate transporter, PiT family id=14624863 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
phosphate transporter
RBG_16_DPX2_64_85_RBG_16_scaffold_505_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8721..9134
DNA (414bp) protein (138aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
glyoxalase/bleomycin resistance protein/dioxygenase id=14624862 bin=bin5_DeltaP species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
glyoxalase/bleomycin resistance protein/dioxygenase
RBG_16_DPX2_64_85_RBG_16_scaffold_505_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9131..11266
DNA (2136bp) protein (712aa)
4-alpha-glucanotransferase (EC:2.4.1.25) Tax=RBG_16_Deltaproteobacteria_64_85_curated
alpha-amylase (EC:3.2.1.1); K07405 alpha-amylase [EC:3.2.1.1] id=14624861 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin5_DeltaP organism_group=Deltaproteobacteria
4-alpha-glucanotransferase (EC:2.4.1.25)
RBG_16_DPX2_64_85_RBG_16_scaffold_505_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11334..12611
DNA (1278bp) protein (426aa)
aromatic hydrocarbon degradation membrane protein; K06076 long-chain fatty acid transport protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
OMPP1/FadL/TodX family outer membrane transport protein; K06076 long-chain fatty acid transport protein id=14624860 bin=bin5_DeltaP species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
aromatic hydrocarbon degradation membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_505_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12756..13277
DNA (522bp) protein (174aa)
alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Alkyl hydroperoxide reductase id=3606175 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
peroxiredoxin
RBG_16_DPX2_64_85_RBG_16_scaffold_505_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13649..14128)
DNA (480bp) protein (160aa)
id=14624856 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624856 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_505_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14281..14409)
DNA (129bp) protein (43aa)
id=14624855 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624855 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_505_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14499..15584)
DNA (1086bp) protein (362aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] id=14624854 bin=bin5_DeltaP species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Zn-dependent protease with chaperone function
RBG_16_DPX2_64_85_RBG_16_scaffold_505_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15589..16137)
DNA (549bp) protein (183aa)
LemA family protein; K03744 LemA protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
LemA family protein id=4143265 bin=GWC2_Proteo_65_14_Ab886 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
LemA family protein
RBG_16_DPX2_64_85_RBG_16_scaffold_505_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16206..18569
DNA (2364bp) protein (788aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
peptidase U32; K08303 putative protease [EC:3.4.-.-] id=14624852 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
peptidase U32
RBG_16_DPX2_64_85_RBG_16_scaffold_505_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18571..20592
DNA (2022bp) protein (674aa)
translation elongation factor G; K02355 elongation factor G Tax=RBG_16_Deltaproteobacteria_64_85_curated
translation elongation factor G; K02355 elongation factor G id=14624851 bin=bin5_DeltaP species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
translation elongation factor G
RBG_16_DPX2_64_85_RBG_16_scaffold_505_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20609..21082
DNA (474bp) protein (158aa)
thioesterase superfamily protein; K02614 acyl-CoA thioesterase [EC:3.1.2.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
thioesterase superfamily protein id=14624844 bin=bin5_DeltaP species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
thioesterase superfamily protein
RBG_16_DPX2_64_85_RBG_16_scaffold_505_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21079..21294
DNA (216bp) protein (72aa)
id=14624845 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624845 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_505_24
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21281..22171)
DNA (891bp) protein (297aa)
beta-lactamase domain-containing protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
beta-lactamase domain-containing protein id=14624846 bin=bin5_DeltaP species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
beta-lactamase domain-containing protein
RBG_16_DPX2_64_85_RBG_16_scaffold_505_25
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22399..22815
DNA (417bp) protein (139aa)
id=4143259 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4143259 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_505_26
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22812..24392)
DNA (1581bp) protein (527aa)
mviN; integral membrane protein MviN2 Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K03980 virulence factor id=14624848 bin=bin5_DeltaP species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
mviN; integral membrane protein MviN2
RBG_16_DPX2_64_85_RBG_16_scaffold_505_27
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24541..25623
DNA (1083bp) protein (361aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RBG_16_Deltaproteobacteria_64_85_curated
Mrp protein id=4895502 bin=GWA2_Deltaproteo_65_63 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_505_28
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25620..26222)
DNA (603bp) protein (201aa)
GCN5-related N-acetyltransferase Tax=RBG_16_Deltaproteobacteria_64_85_curated
GCN5-related N-acetyltransferase id=14624849 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
GCN5-related N-acetyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_505_29
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26390..27178
DNA (789bp) protein (263aa)
enoyl-CoA hydratase/isomerase Tax=RBG_16_Deltaproteobacteria_64_85_curated
enoyl-CoA hydratase/isomerase id=14624850 bin=bin5_DeltaP species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
enoyl-CoA hydratase/isomerase
RBG_16_DPX2_64_85_RBG_16_scaffold_505_30
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27348..29876)
DNA (2529bp) protein (843aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4937982 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
Displaying items 1-30 of 64 in total

View Taxonomy