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RBG_16_DPX2_64_85_RBG_16_scaffold_4336

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1127
DNA (1125bp) protein (375aa)
ATPase Tax=RBG_16_Deltaproteobacteria_64_85_curated
ATPase id=3400576 bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ATPase
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1255..1509
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E554_9BACT
HicA-like protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
HicA-like protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1506..1835
DNA (330bp) protein (110aa)
HicB family protein n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QW65_CYAP0
HicB family protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
HicB family protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1838..2203)
DNA (366bp) protein (122aa)
cytoplasmic protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Hypothetical cytosolic protein id=1891498 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2389..2718)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein id=3400377 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2744..4825)
DNA (2082bp) protein (694aa)
wbfB protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
WbfB protein id=3400376 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
wbfB protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4822..5640)
DNA (819bp) protein (273aa)
polysaccharide export periplasmic protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Polysaccharide export protein id=3730656 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
polysaccharide export periplasmic protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5805..7151
DNA (1347bp) protein (449aa)
nucleotide sugar dehydrogenase Tax=RBG_16_Deltaproteobacteria_64_85_curated
nucleotide sugar dehydrogenase id=14624999 bin=bin5_DeltaP species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin5_DeltaP organism_group=Deltaproteobacteria
nucleotide sugar dehydrogenase
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7293..7748
DNA (456bp) protein (152aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Deltaproteobacteria_64_85_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase id=3400372 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7745..8779
DNA (1035bp) protein (345aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_16_Deltaproteobacteria_64_85_curated
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=14625001 bin=bin5_DeltaP species=Methanothermobacter thermautotrophicus genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
dTDP-glucose 4,6-dehydratase
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8803..9180
DNA (378bp) protein (126aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
VanZ family protein id=14625002 bin=bin5_DeltaP species=Desulfospira joergensenii genus=Desulfospira taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9273..10025
DNA (753bp) protein (251aa)
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RBG_16_Deltaproteobacteria_64_85_curated
Electron transfer flavoprotein subunit beta id=4387348 bin=GWA2_Deltaproteo_65_63 species=Alcanivorax pacificus genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
etfB; electron transfer flavoprotein subunit beta
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10132..11106
DNA (975bp) protein (325aa)
etfA; electron transfer flavoprotein alpha-subunit Tax=RBG_16_Deltaproteobacteria_64_85_curated
Electron transfer flavoprotein subunit alpha id=4728034 bin=GWC2_Deltaproteobacteria_66_88 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
etfA; electron transfer flavoprotein alpha-subunit
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11201..12517
DNA (1317bp) protein (439aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase id=3400359 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12627..13577
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_16_Deltaproteobacteria_64_85_curated
NAD-dependent epimerase/dehydratase id=3400357 bin=GWC2_Proteo_65_14_Ab886 species=Thermoanaerobacter ethanolicus genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14112..15029
DNA (918bp) protein (306aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14625007 bin=bin5_DeltaP species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin5_DeltaP organism_group=Deltaproteobacteria
transposase
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15053..15844)
DNA (792bp) protein (264aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=RBG_16_Deltaproteobacteria_64_85_curated
tRNA (Adenine-N(1)-)-methyltransferase id=3400174 bin=GWC2_Proteo_65_14_Ab886 species=Aeromicrobium marinum genus=Aeromicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
tRNA (adenine-N(1)-)-methyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15841..16788)
DNA (948bp) protein (316aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
PP-loop domain protein id=1891483 bin=GWB2_Deltaproteobacteria_65_81 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16795..16992)
DNA (198bp) protein (66aa)
hypothetical protein; K03154 sulfur carrier protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K03154 sulfur carrier protein id=14624003 bin=bin5_DeltaP species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17083..17397
DNA (315bp) protein (105aa)
id=14624002 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624002 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17494..18435
DNA (942bp) protein (314aa)
putative permease Tax=RBG_16_Deltaproteobacteria_64_85_curated
Auxin Efflux Carrier id=3400166 bin=GWC2_Proteo_65_14_Ab886 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18438..19085)
DNA (648bp) protein (216aa)
hypothetical protein; K00782 hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=3400163 bin=GWC2_Proteo_65_14_Ab886 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19073..20494)
DNA (1422bp) protein (474aa)
iron-sulfur binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
(4Fe-4S) cluster-containing protein id=14623999 bin=bin5_DeltaP species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
iron-sulfur binding protein
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_24
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20494..21246)
DNA (753bp) protein (251aa)
ykgE; putative hydroxyacid oxidoreductase (Fe-S centre) Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=3400159 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ykgE; putative hydroxyacid oxidoreductase (Fe-S centre)
RBG_16_DPX2_64_85_RBG_16_scaffold_4336_25
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21352..22188)
DNA (837bp) protein (279aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein id=1891387 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Displaying 25 items

View Taxonomy