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RBG_16_DPX2_64_85_RBG_16_scaffold_3194

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..182
DNA (180bp) protein (60aa)
OmpR family response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative Phosphate regulon transcriptional regulatory protein phoB id=1731052 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
OmpR family response regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187..1995
DNA (1809bp) protein (603aa)
multi-sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative Sensor protein yycG id=4555820 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
multi-sensor signal transduction histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2071..2475
DNA (405bp) protein (135aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=1718186 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2598..3653
DNA (1056bp) protein (352aa)
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein id=14624871 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
phosphate ABC transporter substrate-binding protein
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3748..4680
DNA (933bp) protein (311aa)
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Phosphate ABC transporter membrane protein 1, PhoT family id=4555826 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
phosphate ABC transporter permease
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4685..5521
DNA (837bp) protein (279aa)
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Phosphate ABC transporter membrane protein 2, PhoT family id=4555828 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
phosphate ABC transporter permease
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5538..6299
DNA (762bp) protein (254aa)
phosphate ABC transporter ATP-binding protein, PhoT family Tax=RBG_16_Deltaproteobacteria_64_85_curated
Phosphate ABC transporter ATP-binding protein, PhoT family id=4555831 bin=GWC2_Proteo_65_14_Ab886 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
phosphate ABC transporter ATP-binding protein, PhoT family
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6321..6983
DNA (663bp) protein (221aa)
phoU-2; phosphate transport system regulatory protein PhoU; K02039 phosphate transport system protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Transcriptional repressor for high-affinity phosphate uptake (Modular protein) id=1891338 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
phoU-2; phosphate transport system regulatory protein PhoU
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7065..8069
DNA (1005bp) protein (335aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RBG_16_Deltaproteobacteria_64_85_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=4555837 bin=GWC2_Proteo_65_14_Ab886 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8513..8734)
DNA (222bp) protein (74aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8731..9300)
DNA (570bp) protein (190aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
cob(I)alamin adenosyltransferase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Cob(I)alamin adenosyltransferase id=4555841 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Nitrosoarchaeum koreensis genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9414..9593
DNA (180bp) protein (60aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=1891354 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9601..10800)
DNA (1200bp) protein (400aa)
flavoprotein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Flavodoxin/nitric oxide synthase id=4555845 bin=GWC2_Proteo_65_14_Ab886 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
flavoprotein
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10812..10970)
DNA (159bp) protein (53aa)
rubredoxin Tax=RBG_16_Deltaproteobacteria_64_85_curated
Rubredoxin id=4555847 bin=GWC2_Proteo_65_14_Ab886 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rubredoxin
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11013..11123)
DNA (111bp) protein (37aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein
Rubredoxin-type Fe(Cys)4 protein id=4555853 bin=GWC2_Proteo_65_14_Ab886 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11225..11743
DNA (519bp) protein (173aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RBG_16_Deltaproteobacteria_64_85_curated
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit id=1891369 bin=GWB2_Deltaproteobacteria_65_81 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11760..12881)
DNA (1122bp) protein (374aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Deoxyhypusine synthase id=4801528 bin=GWC2_Deltaproteobacteria_66_88 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
deoxyhypusine synthase-like protein
RBG_16_DPX2_64_85_RBG_16_scaffold_3194_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12964..14583
DNA (1620bp) protein (540aa)
Fis family transcriptional regulator; K02584 Nif-specific regulatory protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Transcriptional regulator, NifA subfamily, Fis Family id=4555860 bin=GWC2_Proteo_65_14_Ab886 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Fis family transcriptional regulator
Displaying 18 items

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