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RBG_16_DPX2_64_85_RBG_16_scaffold_5483

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..475
DNA (474bp) protein (158aa)
cytochrome c biogenesis protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
ResC/HemX-like cytochrome c biogenesis membrane protein id=3467762 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ResC/HemX-like cytochrome c biogenesis membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

498..1832
DNA (1335bp) protein (445aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] id=14624628 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1825..2763
DNA (939bp) protein (313aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hemC; hydroxymethylbilane synthase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] id=14624629 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hemC; hydroxymethylbilane synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2785..3579
DNA (795bp) protein (265aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=RBG_16_Deltaproteobacteria_64_85_curated
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] id=14624630 bin=bin5_DeltaP species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
uroporphyrin-III C-methyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3576..4553
DNA (978bp) protein (326aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hemB; porphobilinogen synthase; K01698 porphobilinogen synthase [EC:4.2.1.24] id=14624631 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
delta-aminolevulinic acid dehydratase
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4559..4765
DNA (207bp) protein (69aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4943933 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4771..5256
DNA (486bp) protein (162aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624633 bin=bin5_DeltaP species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5225..7795
DNA (2571bp) protein (857aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RBG_16_Deltaproteobacteria_64_85_curated
polA; DNA polymerase I (EC:2.7.7.7) id=14624634 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
DNA polymerase I (EC:2.7.7.7)
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7841..8431
DNA (591bp) protein (197aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
ECF-family RNA polymerase sigma factor id=3467754 bin=GWC2_Proteo_65_14_Ab886 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8436..8912
DNA (477bp) protein (159aa)
id=14624636 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624636 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8899..9363
DNA (465bp) protein (155aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624637 bin=bin5_DeltaP species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9427..9846
DNA (420bp) protein (140aa)
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=3467751 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9886..10833
DNA (948bp) protein (316aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624639 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10948..11532)
DNA (585bp) protein (195aa)
hypothetical protein; K06966 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative lysine decarboxylase id=3467750 bin=GWC2_Proteo_65_14_Ab886 species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11644..12627
DNA (984bp) protein (328aa)
cysteine synthase A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] Tax=RBG_16_Deltaproteobacteria_64_85_curated
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase id=3467749 bin=GWC2_Proteo_65_14_Ab886 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_5483_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12670..13395)
DNA (726bp) protein (242aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE id=3467748 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ubiquinone biosynthesis methyltransferase UbiE
Displaying 16 items

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