ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_1692

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1687)
DNA (1686bp) protein (562aa)
TRAP dicarboxylate transporter subunit DctM Tax=RBG_16_Deltaproteobacteria_64_85_curated
TRAP dicarboxylate transporter, DctM subunit id=4501203 bin=GWA2_Deltaproteo_65_63 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1690..2730)
DNA (1041bp) protein (347aa)
TRAP dicarboxylate transporter subunit DctP Tax=RBG_16_Deltaproteobacteria_64_85_curated
TRAP dicarboxylate transporter-DctP subunit id=4501202 bin=GWA2_Deltaproteo_65_63 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
TRAP dicarboxylate transporter subunit DctP
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2711..3628)
DNA (918bp) protein (306aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4501200 bin=GWA2_Deltaproteo_65_63 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3621..5768)
DNA (2148bp) protein (716aa)
multi-sensor hybrid histidine kinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
PAS/PAC sensor hybrid histidine kinase id=14622963 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5966..8719
DNA (2754bp) protein (918aa)
multi-sensor hybrid histidine kinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
PAS domain S-box id=14622962 bin=bin5_DeltaP species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin5_DeltaP organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8730..9203)
DNA (474bp) protein (158aa)
sugar-phosphate isomerase, RpiB/LacA/LacB family (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RBG_16_Deltaproteobacteria_64_85_curated
ribose-5-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=14622961 bin=bin5_DeltaP species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
sugar-phosphate isomerase, RpiB/LacA/LacB family (EC:5.3.1.6)
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9200..10186)
DNA (987bp) protein (329aa)
glk; glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RBG_16_Deltaproteobacteria_64_85_curated
glk; glucokinase (Glucose kinase) (EC:2.7.1.2) id=14622960 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
glk; glucokinase (EC:2.7.1.2)
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10183..10992)
DNA (810bp) protein (270aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] Tax=RBG_16_Deltaproteobacteria_64_85_curated
pgl; 6-phosphogluconolactonase (EC:3.1.1.31) id=14622959 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
6-phosphogluconolactonase
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10977..12521)
DNA (1545bp) protein (515aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RBG_16_Deltaproteobacteria_64_85_curated
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=4952635 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12527..13447)
DNA (921bp) protein (307aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RBG_16_Deltaproteobacteria_64_85_curated
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating id=4952636 bin=GWC2_Proteo_65_14_Ab886 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13481..14623)
DNA (1143bp) protein (381aa)
bifunctional transaldolase/phosoglucose isomerase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Transaldolase id=4952637 bin=GWC2_Proteo_65_14_Ab886 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
bifunctional transaldolase/phosoglucose isomerase
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14652..16661)
DNA (2010bp) protein (670aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=RBG_16_Deltaproteobacteria_64_85_curated
cbbT; transketolase (TK) (EC:2.2.1.1) id=14622955 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
cbbT; transketolase (TK) (EC:2.2.1.1)
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16673..17605)
DNA (933bp) protein (311aa)
integral membrane protein TerC; K05794 tellurite resistance protein TerC Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized membrane protein STKORF319 id=4952640 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
integral membrane protein TerC
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17735..18259)
DNA (525bp) protein (175aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14622951 bin=bin5_DeltaP species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18377..21151
DNA (2775bp) protein (925aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
acnA; aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] id=14622950 bin=bin5_DeltaP species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
acnA; aconitate hydratase
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21265..21903)
DNA (639bp) protein (213aa)
CBS domain-containing protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
CBS domain-containing protein; K04767 acetoin utilization protein AcuB id=14622949 bin=bin5_DeltaP species=Caldibacillus debilis genus=Caldibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
CBS domain-containing protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22110..22601
DNA (492bp) protein (164aa)
aceF; dihydrolipoamide acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Deltaproteobacteria_64_85_curated
aceF; dihydrolipoamide acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=14622948 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22662..24005)
DNA (1344bp) protein (448aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Glutamate dehydrogenase id=4952673 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
glutamate dehydrogenase
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24152..25222
DNA (1071bp) protein (357aa)
filamentation induced by cAMP protein fic Tax=RBG_16_Deltaproteobacteria_64_85_curated
AsnC family regulatory protein id=14622945 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
filamentation induced by cAMP protein fic
RBG_16_DPX2_64_85_RBG_16_scaffold_1692_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25275..27872)
DNA (2598bp) protein (866aa)
pyruvate phosphate dikinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
pyruvate phosphate dikinase id=14622944 bin=bin5_DeltaP species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
pyruvate phosphate dikinase
Displaying 20 items

View Taxonomy