ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_8519

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(426..1244)
DNA (819bp) protein (273aa)
putative type II secretion system protein F; K12511 tight adherence protein C Tax=RBG_16_Deltaproteobacteria_64_85_curated
type II secretion system protein; K12511 tight adherence protein C id=14624456 bin=bin5_DeltaP species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative type II secretion system protein F
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1241..2092)
DNA (852bp) protein (284aa)
type II secretion system protein; K12510 tight adherence protein B Tax=RBG_16_Deltaproteobacteria_64_85_curated
type II secretion system F domain-containing protein id=4311341 bin=GWC2_Deltaproteobacteria_66_88 species=Acidithiobacillus thiooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
type II secretion system protein
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2083..3300)
DNA (1218bp) protein (406aa)
type II secretion system protein E; K02283 pilus assembly protein CpaF Tax=RBG_16_Deltaproteobacteria_64_85_curated
type II secretion system protein E; K02283 pilus assembly protein CpaF id=14624454 bin=bin5_DeltaP species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
type II secretion system protein E
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3314..4510)
DNA (1197bp) protein (399aa)
type II and III secretion system protein; K02280 pilus assembly protein CpaC Tax=RBG_16_Deltaproteobacteria_64_85_curated
type II and III secretion system protein; K02280 pilus assembly protein CpaC id=14624453 bin=bin5_DeltaP species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
type II and III secretion system protein
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4507..5331)
DNA (825bp) protein (275aa)
putative Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB Tax=RBG_16_Deltaproteobacteria_64_85_curated
Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB id=14624452 bin=bin5_DeltaP species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative Flp pilus assembly protein CpaB
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5821..6294)
DNA (474bp) protein (158aa)
id=4042271 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4042271 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6291..7211)
DNA (921bp) protein (307aa)
id=14624449 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624449 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7208..7654)
DNA (447bp) protein (149aa)
id=14624448 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624448 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7668..7916)
DNA (249bp) protein (83aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Integral membrane protein id=1819551 bin=GWA2_Deltaproteo_65_63 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Flp/Fap pilin-like protein
RBG_16_DPX2_64_85_RBG_16_scaffold_8519_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8093..8821)
DNA (729bp) protein (243aa)
acetoacetate metabolism regulatory protein AtoC; K07714 two-component system, NtrC family, response regulator AtoC Tax=RBG_16_Deltaproteobacteria_64_85_curated
sigma-54 dependent transcription regulator id=14624446 bin=bin5_DeltaP species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
two component, sigma54 specific, transcriptional regulator, Fis family
Displaying 10 items

View Taxonomy