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RBG_16_DPX2_64_85_RBG_16_scaffold_29690

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..517
DNA (516bp) protein (172aa)
id=14623774 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14623774 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

668..988
DNA (321bp) protein (107aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1312..2373
DNA (1062bp) protein (354aa)
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_16_Deltaproteobacteria_64_85_curated
TPR repeats containing protein id=14623815 bin=bin5_DeltaP species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2348..3082)
DNA (735bp) protein (245aa)
cytoplasmic protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
cytoplasmic protein id=14623816 bin=bin5_DeltaP species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
cytoplasmic protein
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3095..3964)
DNA (870bp) protein (290aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Predicted protein (Fragment) id=3343866 bin=GWC2_Deltaproteobacteria_66_88 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4033..4722
DNA (690bp) protein (230aa)
Crp/FNR family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
cAMP-bindin transcriptional regulator (Crp/Fnr family protein); K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein id=14623817 bin=bin5_DeltaP species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4765..6396)
DNA (1632bp) protein (544aa)
nitrite reductase Tax=RBG_16_Deltaproteobacteria_64_85_curated
nitrite reductase id=14623059 bin=bin5_DeltaP species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin5_DeltaP organism_group=Deltaproteobacteria
nitrite reductase
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6462..7313)
DNA (852bp) protein (284aa)
ADA regulatory protein; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] Tax=RBG_16_Deltaprot
ada; ADA regulatory protein (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] id=14623820 bin=bin5_DeltaP species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
6-O-methylguanine DNA methyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7506..8048
DNA (543bp) protein (181aa)
amino acid-binding protein; K03567 glycine cleavage system transcriptional repressor Tax=RBG_16_Deltaproteobacteria_64_85_curated
Amino acid-binding ACT domain protein id=4354318 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
amino acid-binding ACT domain-containing regulatory protein
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8062..8571
DNA (510bp) protein (170aa)
polypeptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Peptide deformylase id=4354316 bin=GWC2_Proteo_65_14_Ab886 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
peptide deformylase
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8580..8942)
DNA (363bp) protein (121aa)
id=14623058 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14623058 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9092..9307)
DNA (216bp) protein (72aa)
id=4814880 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4814880 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_29690_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9348..9542)
DNA (195bp) protein (65aa)
id=4814880 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4814880 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Displaying 13 items

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