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RBG_16_DPX2_64_85_RBG_16_scaffold_1106

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Displaying items 31-60 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_31
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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32821..33618
DNA (798bp) protein (266aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RBG_16_Deltaproteobacteria_64_85_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] id=14623385 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_32
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33640..33924
DNA (285bp) protein (95aa)
regulatory protein SpoVG; K06412 stage V sporulation protein G Tax=RBG_16_Deltaproteobacteria_64_85_curated
septation protein spoVG; K06412 stage V sporulation protein G id=14623386 bin=bin5_DeltaP species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
regulatory protein SpoVG
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_trna_1
unknown

Not on your lists

34012..34082
DNA (71bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_33
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34236..35723
DNA (1488bp) protein (496aa)
HAMP domain/GAF domain/HD domain-containing protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Diguanylate cyclase with PAS/PAC sensor id=4677571 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
sensor cyclic diguanylate phosphodiesterase, HAMP and GAF domain-containing, putative heme-binding site
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_34
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35920..36111
DNA (192bp) protein (64aa)
ferredoxin family protein; K05337 ferredoxin Tax=RBG_16_Deltaproteobacteria_64_85_curated
4Fe-4S ferredoxin; K05337 ferredoxin id=14624957 bin=bin5_DeltaP species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
frx-4; ferredoxin
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_35
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36188..36919
DNA (732bp) protein (244aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=3640317 bin=GWC2_Proteo_65_14_Ab886 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_36
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36916..37878
DNA (963bp) protein (321aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624955 bin=bin5_DeltaP species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_37
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37889..38206
DNA (318bp) protein (106aa)
id=14624954 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624954 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_38
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38340..39692)
DNA (1353bp) protein (451aa)
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain Tax=RBG_16_Deltaproteobacteria_64_85_curated
recombination factor protein RarA; K07478 putative ATPase id=14624953 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_39
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40006..41055
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3Y3_THEGP
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_40
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41191..41625)
DNA (435bp) protein (145aa)
putative peroxiredoxin OsmC (EC:1.11.1.15) Tax=RBG_16_Deltaproteobacteria_64_85_curated
putative peroxiredoxin OsmC (EC:1.11.1.15)
Putative Peroxiredoxin OsmC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJJ3_9BACT
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_41
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42333..43187
DNA (855bp) protein (285aa)
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23] Tax=RBG_16_Deltaproteobacteria_64_85_curated
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23] id=14624950 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
ATP-NAD/AcoX kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_42
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43201..44880
DNA (1680bp) protein (560aa)
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RBG_16_Deltaproteobacteria_64_85_curated
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) id=14624949 bin=bin5_DeltaP species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
DNA repair protein RecN
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_43
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44877..45347
DNA (471bp) protein (157aa)
acetyltransferase; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
acetyltransferase; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] id=14624948 bin=bin5_DeltaP species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
argA; acetyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_44
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45340..46674
DNA (1335bp) protein (445aa)
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein id=14624947 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
peptidase U62 modulator of DNA gyrase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_45
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46677..47342
DNA (666bp) protein (222aa)
pyrimidine 5-nucleotidase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Deltaproteobacteria_64_85_curated
pyrimidine 5-nucleotidase; K07025 putative hydrolase of the HAD superfamily id=14624946 bin=bin5_DeltaP species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
pyrimidine 5-nucleotidase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_46
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47339..49582
DNA (2244bp) protein (748aa)
RNAse E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] Tax=RBG_16_Deltaproteobacteria_64_85_curated
RNAse E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] id=14624945 bin=bin5_DeltaP species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RNAse E (EC:3.1.4.-)
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_47
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49579..50034
DNA (456bp) protein (152aa)
TonB-dependent receptor Tax=RBG_16_Deltaproteobacteria_64_85_curated
TonB-dependent receptor id=4763527 bin=GWC2_Proteo_65_14_Ab886 species=Sulfurovum sp. AR genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_48
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50173..50943)
DNA (771bp) protein (257aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RBG_16_Deltaproteobacteria_64_85_curated
UDP-N-2, O-3-di-(3-hydroxyacyl)glucosamine/UDP-N-2, N-3-di-(3-hydroxyacyl)glucosediamine pyrophosphatase id=4787901 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
lpxH; UDP-N-2, O-3-di-(3-hydroxyacyl)glucosamine/UDP-N-2, N-3-di-(3-hydroxyacyl)glucosediamine pyrophosphatase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_49
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50991..52172
DNA (1182bp) protein (394aa)
cbiB; acyl-CoA transferase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Alpha-methylacyl-CoA racemase id=3518094 bin=GWC2_Deltaproteobacteria_66_88 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
carnitine dehydratase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_50
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52183..52338
DNA (156bp) protein (52aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_51
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52404..53480
DNA (1077bp) protein (359aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
3-methyl-2-oxobutanoate dehydrogenase subunit alpha id=14624941 bin=bin5_DeltaP species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_52
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53494..54459
DNA (966bp) protein (322aa)
transketolase central region; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
transketolase central region; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] id=14624940 bin=bin5_DeltaP species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
transketolase central region
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_53
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54502..55941
DNA (1440bp) protein (480aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] id=14624939 bin=bin5_DeltaP species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
aldehyde dehydrogenase rbh
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_54
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55989..57113
DNA (1125bp) protein (375aa)
branched-chain alpha-keto acid dehydrogenase subunit E2; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Deltaproteobacteria_64_85_curated
branched-chain alpha-keto acid dehydrogenase subunit E2; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=14624938 bin=bin5_DeltaP species=Pyrobaculum calidifontis genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
catalytic domain of components of various dehydrogenase complexes
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_55
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57121..58491
DNA (1371bp) protein (457aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=14624937 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
dihydrolipoamide dehydrogenase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_56
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58507..59478
DNA (972bp) protein (324aa)
putative 2-oxoisovalerate dehydrogenase subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
putative 2-oxoisovalerate dehydrogenase subunit alpha (EC:1.2.4.4)
Putative 2-oxoisovalerate dehydrogenase, alpha subunit (TPP-binding module) id=4763472 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_57
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59479..60453
DNA (975bp) protein (325aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.1); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.1)
Branched-chain alpha-keto acid dehydrogenase E1 component id=4763471 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_58
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60547..61830
DNA (1284bp) protein (428aa)
dihydrolipoyllysine-residue succinyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RBG_16_Deltaproteobacteria_64_8
dihydrolipoyllysine-residue succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase id=4763470 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_59
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61844..62470
DNA (627bp) protein (209aa)
lipoate-protein ligase B/lipoate synthase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Octanoyltransferase id=4763469 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
lipoate-protein ligase B/lipoate synthase
Displaying items 31-60 of 64 in total

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