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RBG_16_DPX2_64_85_RBG_16_scaffold_1106

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Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1572
DNA (1572bp) protein (524aa)
pilus retraction ATPase PilT; K02669 twitching motility protein PilT Tax=RBG_16_Deltaproteobacteria_64_85_curated
Pilus retraction ATPase PilT id=2543110 bin=GWC2_Deltaproteobacteria_66_88 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
pilus retraction ATPase PilT
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1619..2422
DNA (804bp) protein (268aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Deltaproteobacteria_64_85_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase id=1737177 bin=GWB2_Deltaproteobacteria_65_81 species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2422..3420
DNA (999bp) protein (333aa)
3-dehydroquinate synthase Tax=RBG_16_Deltaproteobacteria_64_85_curated
3-dehydroquinate synthase homolog id=4515815 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
3-dehydroquinate synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3485..3670
DNA (186bp) protein (62aa)
hypothetical protein; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Deltaproteobacteria_64_85_curated
Sec-independent protein translocase protein TatA id=1737181 bin=GWB2_Deltaproteobacteria_65_81 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3704..4927)
DNA (1224bp) protein (408aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein id=4628515 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4924..5502)
DNA (579bp) protein (193aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0W4_DESAT
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5499..6269)
DNA (771bp) protein (257aa)
sec-independent protein translocase protein; K03118 sec-independent protein translocase protein TatC Tax=RBG_16_Deltaproteobacteria_64_85_curated
Sec-independent protein translocase, TatC subunit id=4774363 bin=GWC2_Proteo_65_14_Ab886 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
sec-independent protein translocase protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6292..6525)
DNA (234bp) protein (78aa)
twin arginine translocation pathway MttA/Hcf106 family (TatB) protein; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Deltaproteobacteria_64_85_curated
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA id=14623363 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
twin-arginine translocation protein, TatA/E family subunit
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6754..9801
DNA (3048bp) protein (1016aa)
CoA-substrate-specific enzyme activase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative CoA enzyme activase id=4628518 bin=GWA2_Deltaproteo_65_63 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
CoA-substrate-specific enzyme activase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9843..11096
DNA (1254bp) protein (418aa)
CoA-substrate-specific enzyme activase Tax=RBG_16_Deltaproteobacteria_64_85_curated
CoA-substrate-specific enzyme activase id=4774357 bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
CoA-substrate-specific enzyme activase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11093..11830
DNA (738bp) protein (246aa)
calcineurin-like phosphoesterase Tax=RBG_16_Deltaproteobacteria_64_85_curated
metallophosphoesterase id=14623366 bin=bin5_DeltaP species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
calcineurin-like phosphoesterase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11827..12246
DNA (420bp) protein (140aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Protein archease id=4774353 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12283..12546
DNA (264bp) protein (88aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=14623368 bin=bin5_DeltaP species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12525..13730
DNA (1206bp) protein (402aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
UPF0027 protein TK0358 id=4774351 bin=GWC2_Proteo_65_14_Ab886 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13744..14493
DNA (750bp) protein (250aa)
type 11 methyltransferase Tax=RBG_16_Deltaproteobacteria_64_85_curated
methyltransferase type 11 domain-containing protein id=14623369 bin=bin5_DeltaP species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
type 11 methyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14497..16518)
DNA (2022bp) protein (674aa)
multimodular transpeptidase-transglycosylase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Multimodular transpeptidase-transglycosylase id=4628524 bin=GWA2_Deltaproteo_65_63 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
multimodular transpeptidase-transglycosylase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16638..17294
DNA (657bp) protein (219aa)
id=14623371 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14623371 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17397..18035
DNA (639bp) protein (213aa)
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4774345 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18082..18867
DNA (786bp) protein (262aa)
histidine kinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Two-component sensor kinase id=3517102 bin=GWC2_Proteo_65_14_Ab886 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18864..20228
DNA (1365bp) protein (455aa)
Fis family two component sigma-54 specific transcriptional regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=4580156 bin=GWC2_Deltaproteobacteria_66_88 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Fis family two component sigma-54 specific transcriptional regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20445..20822
DNA (378bp) protein (126aa)
two component sigma54 specific Fis family transcriptional regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Transcriptional response regulators id=3517097 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
two component sigma54 specific Fis family transcriptional regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20854..22764
DNA (1911bp) protein (637aa)
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RBG_16_Deltaproteobacteria_64_85_curated
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK id=14623376 bin=bin5_DeltaP species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22821..23273
DNA (453bp) protein (151aa)
Heat shock protein Hsp20 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Heat shock protein Hsp20 id=14623378 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
Heat shock protein Hsp20
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_24
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23357..23809
DNA (453bp) protein (151aa)
Heat shock protein Hsp20 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Heat shock protein Hsp20 id=14623378 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
Heat shock protein Hsp20
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_25
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23816..24814
DNA (999bp) protein (333aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RBG_16_Deltaproteobacteria_64_85_curated
dnaJ2; chaperone protein DnaJ id=14623379 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
chaperone protein DnaJ
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_26
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24887..25750
DNA (864bp) protein (288aa)
M48 family peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=14623380 bin=bin5_DeltaP species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
htpX-2; membrane-bound zinc-dependent protease HtpX
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_27
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25779..28049
DNA (2271bp) protein (757aa)
chaperone activity ATPase Tax=RBG_16_Deltaproteobacteria_64_85_curated
chaperone activity ATPase id=14623381 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
chaperone activity ATPase
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_28
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28050..28502
DNA (453bp) protein (151aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14623382 bin=bin5_DeltaP species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_29
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28499..29962
DNA (1464bp) protein (488aa)
protease Do (EC:3.4.21.107) Tax=RBG_16_Deltaproteobacteria_64_85_curated
Serine protease do-like (EC:3.4.21.-) id=14623383 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
protease Do (EC:3.4.21.107)
RBG_16_DPX2_64_85_RBG_16_scaffold_1106_30
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30022..32613
DNA (2592bp) protein (864aa)
ATP-dependent chaperone ClpB Tax=RBG_16_Deltaproteobacteria_64_85_curated
ATP-dependent chaperone ClpB id=14623384 bin=bin5_DeltaP species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
ATP-dependent chaperone ClpB
Displaying items 1-30 of 64 in total

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