ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_15775

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..276
DNA (276bp) protein (92aa)
cupin Tax=RBG_16_Deltaproteobacteria_64_85_curated
cupin id=14623852 bin=bin5_DeltaP species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
cupin
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322..1899)
DNA (1578bp) protein (526aa)
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_16_Deltaproteobacteria_64_85_curated
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=14623853 bin=bin5_DeltaP species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
2-isopropylmalate synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2280..2891)
DNA (612bp) protein (204aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4005018 bin=GWC2_Deltaproteobacteria_66_88 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2933..3997
DNA (1065bp) protein (355aa)
manAC; mannose-1-phosphate guanylyltransferase Tax=RBG_16_Deltaproteobacteria_64_85_curated
manAC; mannose-1-phosphate guanylyltransferase id=14623855 bin=bin5_DeltaP species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
manAC; mannose-1-phosphate guanylyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4007..4489)
DNA (483bp) protein (161aa)
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA Tax=RBG_16_Deltaproteobacteria_64_85_curated
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=14623856 bin=bin5_DeltaP species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
GreA/GreB family elongation factor
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4506..5024)
DNA (519bp) protein (173aa)
rubrerythrin domain protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
rubrerythrin domain protein id=14624245 bin=bin5_DeltaP species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin5_DeltaP organism_group=Deltaproteobacteria
rubrerythrin domain protein
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5073..5495)
DNA (423bp) protein (141aa)
rubredoxin-type Fe(Cys)4 protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Rubredoxin-type Fe(Cys)4 protein id=2633873 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rubredoxin-type Fe(Cys)4 protein
RBG_16_DPX2_64_85_RBG_16_scaffold_15775_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5939..7495
DNA (1557bp) protein (519aa)
Fis family transcriptional regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family id=3256618 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Fis family transcriptional regulator
Displaying 8 items

View Taxonomy