ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_17166

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2584
DNA (2583bp) protein (861aa)
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RBG_16_Deltaproteobacteria_64_85_curated
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS id=14623570 bin=bin5_DeltaP species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
mutS; DNA mismatch repair protein MutS
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2581..3771
DNA (1191bp) protein (397aa)
N-acetylmuramoyl-L-alanine amidase family protein; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_16_Deltaproteobacteria_64_85_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] id=14623571 bin=bin5_DeltaP species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin5_DeltaP organism_group=Deltaproteobacteria
N-acetylmuramyl-L-alanine amidase
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3758..6454
DNA (2697bp) protein (899aa)
protein-P-II uridylyltransferase; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RBG_16_Deltaproteobacteria_64_85_curated
protein-P-II uridylyltransferase; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=14623572 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
uridylyltransferase
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6465..7001
DNA (537bp) protein (179aa)
phosphoesterase; K07095 Tax=RBG_16_Deltaproteobacteria_64_85_curated
Phosphodiesterase, MJ0936 family id=4503125 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
phosphoesterase
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6998..7909
DNA (912bp) protein (304aa)
xerD; integrase/recombinase XerD; K04763 integrase/recombinase XerD Tax=RBG_16_Deltaproteobacteria_64_85_curated
tyrosine recombinase XerD; K04763 integrase/recombinase XerD id=14623574 bin=bin5_DeltaP species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
xerD; integrase/recombinase XerD
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8049..8714
DNA (666bp) protein (222aa)
frdC; succinate dehydrogenase/fumarate reductase, cytochrome b558 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit Tax=RBG_16_Deltaproteobacteria_64_85_curated
succinate dehydrogenase/fumarate reductase cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit id=14624233 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
frdC; succinate dehydrogenase/fumarate reductase, cytochrome b558 subunit
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8725..10638
DNA (1914bp) protein (638aa)
frdA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
frdA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=14624234 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
frdA; succinate dehydrogenase flavoprotein subunit
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10638..11402
DNA (765bp) protein (255aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
succinate dehydrogenase/fumarate reductase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] id=14624235 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
RBG_16_DPX2_64_85_RBG_16_scaffold_17166_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11610..12317
DNA (708bp) protein (236aa)
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
CBS domain containing protein id=4503230 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
Displaying 9 items

View Taxonomy