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RBG_16_NSX_64_22_RBG_16_scaffold_4389

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_4389_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(110..1501)
DNA (1392bp) protein (464aa)
lpd; dihydrolipoyl dehydrogenase, E3 component of Pyruvate and 2-oxoglutarate dehydrogenase complexes (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RBG_16_Nitrospirae_64_22_cura
lpd; dihydrolipoyl dehydrogenase, E3 component of Pyruvate and 2-oxoglutarate dehydrogenase complexes (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase id=2027195 bin=GWB2_Nitrospirae_rel_47_37 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RBG_16_NSX_64_22_RBG_16_scaffold_4389_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

1631..2488
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTD5_9PLAN
radical SAM domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
radical SAM domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2526..3377)
DNA (852bp) protein (284aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_4389_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(3828..4970)
DNA (1143bp) protein (381aa)
Tetratricopeptide repeat domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09CR0_STIAD
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
zinc finger/thioredoxin
RBG_16_NSX_64_22_RBG_16_scaffold_4389_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4983..5333)
DNA (351bp) protein (117aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=3890963 bin=GWA2_Deltaproteo_65_63 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5476..5796)
DNA (321bp) protein (107aa)
Uncharacterized protein n=3 Tax=Leptospirillum RepID=J9ZDX1_LEPFM
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6446..7012)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00035FAEF3
RlpA-like lipoprotein; K03642 rare lipoprotein A Tax=RBG_16_Nitrospirae_64_22_curated
lipoprotein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(7224..7925)
DNA (702bp) protein (234aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SXT5_PLAL2
exsB protein; K06920 queuosine biosynthesis protein QueC Tax=RBG_16_Nitrospirae_64_22_curated
exsB protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(7922..8554)
DNA (633bp) protein (211aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Methylococcus capsulatus RepID=UPI0002D51509
radical activating enzyme family protein; K10026 queuosine biosynthesis protein QueE Tax=RBG_16_Nitrospirae_64_22_curated
radical activating enzyme family protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8551..9273)
DNA (723bp) protein (241aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Nitrospirae_64_22_curated
Branched-chain amino acid ABC transporter, ATP-binding protein id=4950054 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
ABC transporter-like protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(9266..10036)
DNA (771bp) protein (257aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Nitrospirae_64_22_curated
ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter) putative branched-chain amino acid transport protein id=1746573 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
ABC transporter-like protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10041..11216)
DNA (1176bp) protein (392aa)
ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter) putative branched-chain amino acid transport protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC7_9BACT
branched-chain amino acid ABC transporter permease/ATP-binding protein Tax=RBG_16_Nitrospirae_64_22_curated
branched-chain amino acid ABC transporter permease/ATP-binding protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11216..12124)
DNA (909bp) protein (303aa)
livH; high-affinity branched-chain amino acid ABC transporter permease Tax=RBG_16_Nitrospirae_64_22_curated
High-affinity branched-chain amino acid ABC transporter (Permease protein) id=4128060 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
livH; high-affinity branched-chain amino acid ABC transporter permease
RBG_16_NSX_64_22_RBG_16_scaffold_4389_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(12141..13274)
DNA (1134bp) protein (378aa)
livK; high-affinity branched-chain amino acid ABC transporter (substrate-binding protein) Tax=RBG_16_Nitrospirae_64_22_curated
High-affinity branched-chain amino acid ABC transporter (Substrate-binding protein) id=4128224 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
livK; high-affinity branched-chain amino acid ABC transporter (substrate-binding protein)
RBG_16_NSX_64_22_RBG_16_scaffold_4389_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13285..13941)
DNA (657bp) protein (219aa)
thiamine-phosphate diphosphorylase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RBG_16_Nitrospirae_64_22_curated
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYY9_THEOJ
RBG_16_NSX_64_22_RBG_16_scaffold_4389_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13938..15281)
DNA (1344bp) protein (448aa)
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RBG_16_Nitrospirae_64_22_curated
accC; acetyl-Coa carboxylase, biotin carboxylase (EC:6.4.1.2 6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase id=1991009 bin=GWD2_Nitrospirae-related_57_8 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RBG_16_NSX_64_22_RBG_16_scaffold_4389_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15274..15753)
DNA (480bp) protein (160aa)
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RBG_16_Nitrospirae_64_22_curated
Acetyl-CoA carboxylase, biotin carboxyl carrier protein id=3932802 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
accB; acetyl Coa carboxylase, biotin carboxyl carrier protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15756..16394)
DNA (639bp) protein (213aa)
Elongation factor P n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9V5_DESTA
translation elongation factor P Tax=RBG_16_Nitrospirae_64_22_curated
translation elongation factor P
RBG_16_NSX_64_22_RBG_16_scaffold_4389_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16472..16933)
DNA (462bp) protein (154aa)
3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RBG_16_Nitrospirae_64_22_curated
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] id=1245782 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
3-dehydroquinate dehydratase (EC:4.2.1.10)
RBG_16_NSX_64_22_RBG_16_scaffold_4389_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16930..17286)
DNA (357bp) protein (119aa)
GTPase-activating protein Tax=RBG_16_Nitrospirae_64_22_curated
GTPase-activating protein
Putative uncharacterized protein id=3932798 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RBG_16_NSX_64_22_RBG_16_scaffold_4389_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17283..18605)
DNA (1323bp) protein (441aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=7200674 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tetratricopeptide repeat-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18765..20024)
DNA (1260bp) protein (420aa)
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase Phosphopantothenate-cysteine ligase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJA2_THEM7
RBG_16_NSX_64_22_RBG_16_scaffold_4389_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(20014..20427)
DNA (414bp) protein (138aa)
hyaluronan receptor rhamm; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=RBG_16_Nitrospirae_64_22_curated
DNA-directed RNA polymerase subunit omega id=3843351 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hyaluronan receptor rhamm
RBG_16_NSX_64_22_RBG_16_scaffold_4389_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(20439..21068)
DNA (630bp) protein (210aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=RBG_16_Nitrospirae_64_22_curated
Guanylate kinase id=4125334 bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
guanylate kinase
RBG_16_NSX_64_22_RBG_16_scaffold_4389_25
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(21073..21945)
DNA (873bp) protein (291aa)
YicC-like domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=14632839 bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
YicC-like domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_26
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

22072..22773
DNA (702bp) protein (234aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Nitrospirae_64_22_curated
octanoyltransferase n=1 Tax=Laceyella sacchari RepID=UPI0003B43E66
biotin/lipoate A/B protein ligase
RBG_16_NSX_64_22_RBG_16_scaffold_4389_27
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(23339..25912)
DNA (2574bp) protein (858aa)
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RBG_16_Nitrospirae_64_22_curated
DNA mismatch repair protein MutS id=4907887 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
DNA mismatch repair protein MutS
RBG_16_NSX_64_22_RBG_16_scaffold_4389_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(25938..26417)
DNA (480bp) protein (160aa)
HIT family hydrolase n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6762C
histidine triad (hit) protein Tax=RBG_16_Nitrospirae_64_22_curated
histidine triad (hit) protein
RBG_16_NSX_64_22_RBG_16_scaffold_4389_29
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(26428..28314)
DNA (1887bp) protein (629aa)
adenylate/guanylate cyclase Tax=RBG_16_Nitrospirae_64_22_curated
GAF sensor-containing adenylate/guanylate cyclase id=14430952 bin=bin3_NC10 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase
RBG_16_NSX_64_22_RBG_16_scaffold_4389_30
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(28311..29009)
DNA (699bp) protein (233aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RBG_16_Nitrospirae_64_22_curated
Phage SPO1 DNA polymerase-related protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAG1_ANADF
phage SPO1 DNA polymerase-like protein
Displaying items 1-30 of 42 in total

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