ggKbase home page

RBG_16_NSX_64_22_RBG_16_scaffold_2762_20

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 25007..25441

Top 3 Functional Annotations

Value Algorithm Source
positive regulator of sigma E activity; K03803 sigma-E factor negative regulatory protein RseC Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 288
  • Evalue 4.70e-75
Membrane protein RseC id=3674308 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 144.0
  • Bit_score: 111
  • Evalue 5.70e-22
membrane protein RseC similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 145.0
  • Bit_score: 72
  • Evalue 8.20e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 435
ATGCTTGAGGAGGAAGGGGTCGTCGTCGGGGTAGATGGCGGGATCGCCCGGGTGCGGATCGAGCCGAAGGGGACCTGCGAATCGTGCGCCTCGTCGGGCTCCTGCAAGATGACGCCGGACCCCACGGGGGTTCTCGAAGCCGTGAACACGCCGGGTGCGCGGATCGGCCAGCGGGTCCGCGTAACGATGAAGCCCGGCGTCGTTCTCAAGGCGTCCTTCTTCCTGTACGGGATTCCCCTGACGGATGCGATCATTTTTGCCATCGTCGCGAAGATCATGGCCGTCAAGATGGAGCTCCCGGGCGACCCGGACCTCTGGGCCTTCGGCGCGGGGCTCCTCGGCTTGATAACGACGTATCTCGTCATGAAGCTCGTCTACAGGCTGATCGAGGGGAACCCGGACTTTAAGCCGAGGATTGTGGAAATCATCGGTTAA
PROTEIN sequence
Length: 145
MLEEEGVVVGVDGGIARVRIEPKGTCESCASSGSCKMTPDPTGVLEAVNTPGARIGQRVRVTMKPGVVLKASFFLYGIPLTDAIIFAIVAKIMAVKMELPGDPDLWAFGAGLLGLITTYLVMKLVYRLIEGNPDFKPRIVEIIG*