ggKbase home page

RBG_16_NSX_64_22_RBG_16_scaffold_2762

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_2762_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

267..545
DNA (279bp) protein (93aa)
Plasmid maintenance system killer n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UPP9_DESML
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RBG_16_Nitrospirae_64_22_curated
excinuclease ABC subunit A
RBG_16_NSX_64_22_RBG_16_scaffold_2762_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

558..875
DNA (318bp) protein (106aa)
Helix-turn-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NV36_9DELT
XRE family plasmid maintenance system antidote protein Tax=RBG_16_Nitrospirae_64_22_curated
XRE family transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_2762_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1110..1511)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGU3_9BACT
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_2762_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1596..2117)
DNA (522bp) protein (174aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RBG_16_Nitrospirae_64_22_curated
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5W4M7_9DELT
RBG_16_NSX_64_22_RBG_16_scaffold_2762_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2123..4423)
DNA (2301bp) protein (767aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RBG_16_Nitrospirae_64_22_curated
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
RBG_16_NSX_64_22_RBG_16_scaffold_2762_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4420..5253)
DNA (834bp) protein (278aa)
Phosphate/phosphonate ABC transporter substrate-binding protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BFX9_9GAMM
phosphate/phosphonate ABC transporter periplasmic protein; K02044 phosphonate transport system substrate-binding protein Tax=RBG_16_Nitrospirae_64_22_curated
phosphate/phosphonate ABC transporter periplasmic protein
RBG_16_NSX_64_22_RBG_16_scaffold_2762_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

5353..6240
DNA (888bp) protein (296aa)
MCP methyltransferase, CheR-type with PAS/PAC sensor (EC:2.1.1.80) Tax=RBG_16_Nitrospirae_64_22_curated
MCP methyltransferase, CheR-type with PAS/PAC sensor (EC:2.1.1.80)
MCP methyltransferase, CheR-type with PAS/PAC sensor n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZLA5_ANACC
RBG_16_NSX_64_22_RBG_16_scaffold_2762_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6276..8882)
DNA (2607bp) protein (869aa)
Metallo-beta-lactamase superfamily Tax=RBG_16_Nitrospirae_64_22_curated
Putative Competence protein ComEC/Rec2 related protein id=4539188 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Metallo-beta-lactamase superfamily
RBG_16_NSX_64_22_RBG_16_scaffold_2762_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8899..11451)
DNA (2553bp) protein (851aa)
prkC; serine/threonine-protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Nitrospirae_64_22_curated
Serine/threonine protein kinase n=2 Tax=Bacteria RepID=J2IBT6_9BACL
prkC; serine/threonine-protein kinase
RBG_16_NSX_64_22_RBG_16_scaffold_2762_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11466..12833)
DNA (1368bp) protein (456aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RBG_16_Nitrospirae_64_22_curated
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGQ4_9BACT
RBG_16_NSX_64_22_RBG_16_scaffold_2762_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13019..13876)
DNA (858bp) protein (286aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RBG_16_Nitrospirae_64_22_curated
folP; dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase) (EC:2.5.1.15) id=14430109 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
dihydropteroate synthase
RBG_16_NSX_64_22_RBG_16_scaffold_2762_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13873..15714)
DNA (1842bp) protein (614aa)
ftsH-2; ATP-dependent Zn protease Tax=RBG_16_Nitrospirae_64_22_curated
ATP-dependent zinc metalloprotease FtsH id=3929833 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cell division protein FtsH
RBG_16_NSX_64_22_RBG_16_scaffold_2762_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(15902..17290)
DNA (1389bp) protein (463aa)
cell cycle protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RBG_16_Nitrospirae_64_22_curated
tRNA(Ile)-lysidine synthase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=TILS_SYMTH
cell cycle protein
RBG_16_NSX_64_22_RBG_16_scaffold_2762_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

17496..17798
DNA (303bp) protein (101aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_2762_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

18140..19360
DNA (1221bp) protein (407aa)
yfdZ; pLp-dependent aminotransferase (EC:2.6.1.-); K14261 alanine-synthesizing transaminase [EC:2.6.1.-] Tax=RBG_16_Nitrospirae_64_22_curated
yfdZ; pLp-dependent aminotransferase (EC:2.6.1.-)
PLP-dependent aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8F2_9BACT
RBG_16_NSX_64_22_RBG_16_scaffold_2762_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

19357..20673
DNA (1317bp) protein (439aa)
hom; homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=RBG_16_Nitrospirae_64_22_curated
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase id=3674318 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RBG_16_NSX_64_22_RBG_16_scaffold_2762_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

20675..21760
DNA (1086bp) protein (362aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_16_Nitrospirae_64_22_curated
Threonine synthase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3M3_THEA1
threonine synthase
RBG_16_NSX_64_22_RBG_16_scaffold_2762_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

21831..23072
DNA (1242bp) protein (414aa)
lysC; aspartokinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_16_Nitrospirae_64_22_curated
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase id=3103468 bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_2762_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

23252..24823
DNA (1572bp) protein (524aa)
2-isopropylmalate synthase (EC:2.3.1.182); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_16_Nitrospirae_64_22_curated
2-isopropylmalate synthase (EC:2.3.1.182)
2-isopropylmalate synthase/homocitrate synthase family protein id=4923738 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RBG_16_NSX_64_22_RBG_16_scaffold_2762_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

25007..25441
DNA (435bp) protein (145aa)
positive regulator of sigma E activity; K03803 sigma-E factor negative regulatory protein RseC Tax=RBG_16_Nitrospirae_64_22_curated
Membrane protein RseC id=3674308 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
membrane protein RseC
RBG_16_NSX_64_22_RBG_16_scaffold_2762_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

25689..26882
DNA (1194bp) protein (398aa)
translation elongation factor G; K02355 elongation factor G Tax=RBG_16_Nitrospirae_64_22_curated
Elongation factor G id=3103481 bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
translation elongation factor G
Displaying 21 items

View Taxonomy