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RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_1
R_WOR_1_53_15, WOR-1, Bacteria

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2..523
DNA (522bp) protein (174aa)
Rubrerythrin subfamily n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGJ5_THEYD
rubrerythrin subfamily Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
rubrerythrin subfamily
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_2
R_WOR_1_53_15, WOR-1, Bacteria

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604..1023
DNA (420bp) protein (140aa)
Ferritin, Dps family protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DMK7_STAMF
Ferritin, Dps family protein; K03594 bacterioferritin Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Ferritin, Dps family protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_3
R_WOR_1_53_15, WOR-1, Bacteria

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1255..1830
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036A7FBA
rubrerythrin Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
rubrerythrin
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_4
R_WOR_1_53_15, WOR-1, Bacteria

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1863..2399
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00035C2D00
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_5
R_WOR_1_53_15, WOR-1, Bacteria

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2524..2964
DNA (441bp) protein (147aa)
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Ferric uptake regulator, Fur family id=3984117 bin=GWF2_OP3_43_52 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
fur; ferric uptake regulation protein Fur
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_6
R_WOR_1_53_15, WOR-1, Bacteria

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3067..3798
DNA (732bp) protein (244aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein id=1966158 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_7
R_WOR_1_53_15, WOR-1, Bacteria

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3749..4030
DNA (282bp) protein (94aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_8
R_WOR_1_53_15, WOR-1, Bacteria

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4027..4773
DNA (747bp) protein (249aa)
Marine sediment metagenome DNA, contig: S01H1_S09009 Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_9
R_WOR_1_53_15, WOR-1, Bacteria

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4800..6587
DNA (1788bp) protein (596aa)
Ferrous iron transport protein B n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS26_9BACT
small GTP-binding protein; K04759 ferrous iron transport protein B Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
small GTP-binding protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_10
R_WOR_1_53_15, WOR-1, Bacteria

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6584..6766
DNA (183bp) protein (61aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_11
R_WOR_1_53_15, WOR-1, Bacteria

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6763..7236
DNA (474bp) protein (158aa)
iron dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Iron (Metal) dependent repressor, DtxR family id=4574728 bin=GWC2_Deltaproteobacteria_55_46 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
iron dependent repressor
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_12
R_WOR_1_53_15, WOR-1, Bacteria

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7236..7757
DNA (522bp) protein (174aa)
alkyl hydroperoxide reductase Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Thiol-disulfide oxidoreductase ResA id=2008417 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
alkyl hydroperoxide reductase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_13
R_WOR_1_53_15, WOR-1, Bacteria

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7754..8446
DNA (693bp) protein (231aa)
ccdA; cytochrome c biogenesis protein CcdA; K06196 cytochrome c-type biogenesis protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Cytochrome c biogenesis protein CcdA id=3930461 bin=GWF2_Nitrospirae_44_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ccdA; cytochrome c biogenesis protein CcdA
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_14
R_WOR_1_53_15, WOR-1, Bacteria

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8476..8667
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U0G7_THEAM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_15
R_WOR_1_53_15, WOR-1, Bacteria

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8742..9086
DNA (345bp) protein (115aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_16
R_WOR_1_53_15, WOR-1, Bacteria

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9203..9391
DNA (189bp) protein (63aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K05337 ferredoxin Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
4Fe-4S binding domain protein id=2127580 bin=GWD2_RBX1-related_39_127 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_17
R_WOR_1_53_15, WOR-1, Bacteria

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9408..9824
DNA (417bp) protein (139aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G2Y8_CHLAD
BadM/Rrf2 family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
BadM/Rrf2 family transcriptional regulator
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_18
R_WOR_1_53_15, WOR-1, Bacteria

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9826..10635
DNA (810bp) protein (270aa)
hypothetical protein; K06864 uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
PP-loop domain-containing protein; K06864 uncharacterized protein id=16846009 bin=RBG_16_Aminicenantes_63_16_plus species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_19
R_WOR_1_53_15, WOR-1, Bacteria

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10632..11720
DNA (1089bp) protein (363aa)
Geranylgeranyl reductase family protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UHQ8_9CHRO
geranylgeranyl reductase family protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
geranylgeranyl reductase family protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_20
R_WOR_1_53_15, WOR-1, Bacteria

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11733..12917
DNA (1185bp) protein (395aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
toc:Toce_1130 cysteine desulfurase NifS (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] id=1242288 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
cysteine desulfurase NifS (EC:2.8.1.7)
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_21
R_WOR_1_53_15, WOR-1, Bacteria

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12919..14475
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036284F2
Mja hyp1 intein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Mja hyp1 intein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_22
R_WOR_1_53_15, WOR-1, Bacteria

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14438..15574
DNA (1137bp) protein (379aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX93_MAHA5
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_23
R_WOR_1_53_15, WOR-1, Bacteria

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comp(15562..16647)
DNA (1086bp) protein (362aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_24
R_WOR_1_53_15, WOR-1, Bacteria

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17008..17481
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IH91_9PLAN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_25
R_WOR_1_53_15, WOR-1, Bacteria

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17474..17662
DNA (189bp) protein (63aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_26
R_WOR_1_53_15, WOR-1, Bacteria

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17662..18576
DNA (915bp) protein (305aa)
quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Quinolinate synthase A id=4098689 bin=GWF2_OP3_43_52 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
quinolinate synthetase complex subunit A
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_27
R_WOR_1_53_15, WOR-1, Bacteria

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comp(18608..19036)
DNA (429bp) protein (143aa)
Histidine kinase (EC:2.7.13.3) id=14626869 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
sigma-54 dependent DNA-binding response regulator Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
sigma-54 dependent DNA-binding response regulator
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_28
R_WOR_1_53_15, WOR-1, Bacteria

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19212..19514
DNA (303bp) protein (101aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_29
R_WOR_1_53_15, WOR-1, Bacteria

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19516..20889
DNA (1374bp) protein (458aa)
MesJ3; ATPase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035EE596
MesJ3; ATPase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2940_30
R_WOR_1_53_15, WOR-1, Bacteria

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20886..22088
DNA (1203bp) protein (401aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP17_DESK7
Displaying items 1-30 of 42 in total

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