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RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383

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Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_1
R_WOR_1_53_15, WOR-1, Bacteria

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106..405
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFB4_9CLOT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_2
R_WOR_1_53_15, WOR-1, Bacteria

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551..862
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LYW8_CLOCD
50S ribosomal protein L21P; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
50S ribosomal protein L21P
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_3
R_WOR_1_53_15, WOR-1, Bacteria

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852..1091
DNA (240bp) protein (80aa)
50S ribosomal protein L27 n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTR0_SPHGB
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
50S ribosomal protein L27
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_4
R_WOR_1_53_15, WOR-1, Bacteria

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1106..1876
DNA (771bp) protein (257aa)
glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Glutamate 5-kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNY5_9FIRM
glutamate 5-kinase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_5
R_WOR_1_53_15, WOR-1, Bacteria

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1911..3314
DNA (1404bp) protein (468aa)
extracellular solute-binding protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Extracellular solute-binding protein family 1 id=3914660 bin=GWF2_OP9_related_35_9 species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
extracellular solute-binding protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_6
R_WOR_1_53_15, WOR-1, Bacteria

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3412..5244
DNA (1833bp) protein (611aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] id=2161372 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glmS-2; glucosamine--fructose-6-phosphate aminotransferase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_7
R_WOR_1_53_15, WOR-1, Bacteria

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5272..8370
DNA (3099bp) protein (1033aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Putative uncharacterized protein id=2010416 bin=GWB2_CP_45_9 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_8
R_WOR_1_53_15, WOR-1, Bacteria

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8484..9167
DNA (684bp) protein (228aa)
beta-galactosidase (EC:3.2.1.23); K12308 beta-galactosidase [EC:3.2.1.23] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Beta-galactosidase n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BUF6_XYLCX
beta-galactosidase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_9
R_WOR_1_53_15, WOR-1, Bacteria

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9332..10285
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003698CDA
bgaA; beta-galactosidase BgaA Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
beta-galactosidase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_10
R_WOR_1_53_15, WOR-1, Bacteria

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10237..12579
DNA (2343bp) protein (781aa)
cellobiose phosphorylase (EC:2.4.1.20) Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
cellobiose phosphorylase (EC:2.4.1.20)
Cellobiose phosphorylase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVZ6_MAHA5
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_11
R_WOR_1_53_15, WOR-1, Bacteria

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comp(12576..13427)
DNA (852bp) protein (284aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPM5_SYNAS
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_12
R_WOR_1_53_15, WOR-1, Bacteria

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13516..14214
DNA (699bp) protein (233aa)
cbiM; protein CbiM; K02007 cobalt/nickel transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Cobalamin (Vitamin B12) biosynthesis CbiM protein id=3461946 bin=GWC1_Spirochaetes_27_15 species=Chitiniphilus shinanonensis genus=Chitiniphilus taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
cbiM; protein CbiM
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_13
R_WOR_1_53_15, WOR-1, Bacteria

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comp(14276..15115)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWM0_ROSS1 id=5223568 bin=16ft_combo_ws3_JS1 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Nucleoside-diphosphate-sugar pyrophosphorylase Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Nucleoside-diphosphate-sugar pyrophosphorylase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_14
R_WOR_1_53_15, WOR-1, Bacteria

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comp(15112..16302)
DNA (1191bp) protein (397aa)
ackA; acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
propionate kinase (EC:2.7.2.15)
Acetate kinase n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ALM6_GEOSK
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_15
R_WOR_1_53_15, WOR-1, Bacteria

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16356..17312
DNA (957bp) protein (319aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase id=3467283 bin=GWF2_OP9_related_35_9 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_16
R_WOR_1_53_15, WOR-1, Bacteria

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comp(17305..18627)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI000312898B
MelB; Na+/melibiose symporter and related transporters; K03292 glycoside/pentoside/hexuronide:cation symporter, GPH family Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
MelB; Na+/melibiose symporter and related transporters
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_17
R_WOR_1_53_15, WOR-1, Bacteria

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comp(18624..19133)
DNA (510bp) protein (170aa)
cob(I)alamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Cob(I)alamin adenosyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP39_METAC
cob(I)alamin adenosyltransferase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_18
R_WOR_1_53_15, WOR-1, Bacteria

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comp(19130..20650)
DNA (1521bp) protein (507aa)
ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase id=1778047 bin=GWB2_Proteobacteria_55_19 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_19
R_WOR_1_53_15, WOR-1, Bacteria

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comp(20669..20842)
DNA (174bp) protein (58aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIR4_KOSOT
4Fe-4S ferredoxin iron-sulfur binding domain protein; K05337 ferredoxin Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_20
R_WOR_1_53_15, WOR-1, Bacteria

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comp(20861..21526)
DNA (666bp) protein (222aa)
PhoU family transcriptional regulator n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7A572
phoU; phosphate transport system protein PhoU; K02039 phosphate transport system protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
phoU; phosphate transport system protein PhoU
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_21
R_WOR_1_53_15, WOR-1, Bacteria

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comp(21526..22275)
DNA (750bp) protein (250aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
tjr:TherJR_2127 phosphate ABC transporter, ATPase subunit; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=128949 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
phosphate ABC transporter ATPase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_22
R_WOR_1_53_15, WOR-1, Bacteria

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comp(22275..23024)
DNA (750bp) protein (250aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
phosphate ABC transporter ATPase (EC:3.6.3.27)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3AF1C
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_23
R_WOR_1_53_15, WOR-1, Bacteria

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comp(23018..23866)
DNA (849bp) protein (283aa)
pstA; putative phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Phosphate ABC transporter, inner membrane subunit PstA id=3432151 bin=GWF2_OP3_38_59 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
pstA; putative phosphate ABC transporter permease
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_24
R_WOR_1_53_15, WOR-1, Bacteria

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comp(23863..24732)
DNA (870bp) protein (290aa)
ABC-type phosphate transporter permease component ; K02037 phosphate transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
rsd:TGRD_393 ABC-type phosphate transporter permease component ; K02037 phosphate transport system permease protein id=128947 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ABC-type phosphate transporter permease component
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_25
R_WOR_1_53_15, WOR-1, Bacteria

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comp(24729..25580)
DNA (852bp) protein (284aa)
putative phosphate ABC transporter substrate binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Phosphate abc transporter, phosphate-binding protein pstd id=4321147 bin=GWC2_OP3_44_8 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
putative phosphate ABC transporter substrate binding protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_26
R_WOR_1_53_15, WOR-1, Bacteria

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comp(25641..26627)
DNA (987bp) protein (329aa)
VicK; signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Signal transduction histidine kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D189_PELTS
VicK; signal transduction histidine kinase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_27
R_WOR_1_53_15, WOR-1, Bacteria

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comp(26644..27366)
DNA (723bp) protein (241aa)
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=3 Tax=Caldanaerobacter subterraneus RepID=Q8R9H7_THETN
OmpR4; response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
OmpR4; response regulator
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_28
R_WOR_1_53_15, WOR-1, Bacteria

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27372..28772
DNA (1401bp) protein (467aa)
thiH; thiamine biosynthesis protein ThiH (EC:2.8.1.6); K03150 thiamine biosynthesis ThiH Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
thiH; thiamine biosynthesis protein ThiH (EC:2.8.1.6)
Biotin synthase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CZG0_HALOH
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_29
R_WOR_1_53_15, WOR-1, Bacteria

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comp(28805..29080)
DNA (276bp) protein (92aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_383_30
R_WOR_1_53_15, WOR-1, Bacteria

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comp(29362..29823)
DNA (462bp) protein (154aa)
cyclic nucleotide-binding protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
putative transcriptional regulator, Crp/Fnr family id=1241506 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
conserved protein of unknown function[Include cyclic nucleotide-binding domain]
Displaying items 1-30 of 96 in total

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