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RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_1
R_WOR_1_53_15, WOR-1, Bacteria

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2..2647
DNA (2646bp) protein (882aa)
cadherin Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
chromosome condensation regulator RCC1 id=15189923 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
cadherin
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_2
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

2644..3687
DNA (1044bp) protein (348aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Uncharacterized protein id=1783071 bin=GWD2_RBX1-related_39_127 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_3
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

3684..4967
DNA (1284bp) protein (428aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2C351_9BACT
Uncharacterized protein (Fragment) Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_4
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

4934..6745
DNA (1812bp) protein (604aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_5
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

6789..7286
DNA (498bp) protein (166aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Thermincola potens (strain JR) RepID=D5XEH3_THEPJ
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_6
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

7283..7879
DNA (597bp) protein (199aa)
hypothetical protein; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V697_CLOSS
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_7
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(7876..8397)
DNA (522bp) protein (174aa)
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RC25_AMMDK
HAD superfamily phosphatase; K07015 Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
HAD superfamily phosphatase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_8
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(8372..8674)
DNA (303bp) protein (101aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_9
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(8671..9372)
DNA (702bp) protein (234aa)
Oligopeptide ABC transporter substrate-binding protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WIM7_BACSK
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
ABC transporter substrate-binding protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_10
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(9386..9916)
DNA (531bp) protein (177aa)
hypothetical protein; K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
FumB n=2 Tax=Clostridium kluyveri RepID=A5N4X7_CLOK5
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_11
R_WOR_1_53_15, WOR-1, Bacteria

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comp(9913..10755)
DNA (843bp) protein (281aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
fumarate hydratase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T591_THEIA
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_12
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(10758..11039)
DNA (282bp) protein (94aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_13
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(11045..11263)
DNA (219bp) protein (73aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_14
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(11452..12381)
DNA (930bp) protein (310aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Malate dehydrogenase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TQA2_DESML
malate dehydrogenase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_15
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists


comp(12378..13196)
DNA (819bp) protein (273aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
dimethyladenosine transferase (EC:2.1.1.48)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F228_9FIRM
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_16
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(13193..14191)
DNA (999bp) protein (333aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2; K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
4-hydroxythreonine-4-phosphate dehydrogenase id=2095280 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_17
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(14181..15362)
DNA (1182bp) protein (394aa)
aspartate aminotransferase (EC:2.6.1.1); K00837 [EC:2.6.1.-] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase, classes I and II n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JV47_SYNJA
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_18
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(15359..16207)
DNA (849bp) protein (283aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
lipA; lipoyl synthase (EC:2.8.1.8)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037B6333
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_19
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(16208..17266)
DNA (1059bp) protein (353aa)
Twitching motility protein PilT n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATX1_9CLOT
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
twitching motility protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_20
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

17336..18100
DNA (765bp) protein (255aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AMP0_PELPD
prepilin peptidase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_21
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

18097..18357
DNA (261bp) protein (87aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_22
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

18358..18768
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI00030B0C22
hypothetical protein; K07571 S1 RNA binding domain protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_23
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(18873..20099)
DNA (1227bp) protein (409aa)
Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Two component system response regulator, sigma54-specific id=2971030 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_24
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(20096..20431)
DNA (336bp) protein (112aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_25
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(20556..21902)
DNA (1347bp) protein (449aa)
two component system response regulator, sigma54-specific Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
AtoC; response regulator; K07714 two-component system, NtrC family, response regulator AtoC id=14626375 bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
two component system response regulator, sigma54-specific
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_26
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(21936..23276)
DNA (1341bp) protein (447aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RNA polymerase, sigma 54 subunit, RpoN id=1870876 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNA polymerase, sigma 54 subunit, RpoN/SigL
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_27
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

23385..25775
DNA (2391bp) protein (797aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=planctomycete KSU-1 RepID=I3ILN7_9PLAN
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_28
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(25865..27637)
DNA (1773bp) protein (591aa)
phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] id=4113710 bin=GWF2_OP3_43_52 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_29
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(27905..29554)
DNA (1650bp) protein (550aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_464_30
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(29576..29713)
DNA (138bp) protein (46aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Displaying items 1-30 of 169 in total

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