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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

205..456
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BGG3_PETMO
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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460..684
DNA (225bp) protein (75aa)
hypothetical protein; K07339 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
YcfA family protein id=5093991 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

1029..3170
DNA (2142bp) protein (714aa)
Elongation factor G n=1 Tax=uncultured bacterium RepID=K2F0T9_9BACT
fusA-3; translation elongation factor G; K02355 elongation factor G Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
fusA-3; elongation factor G
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_4
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

3204..3461
DNA (258bp) protein (86aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

3619..4839
DNA (1221bp) protein (407aa)
acp:A2cp1_2367 elongation factor Tu (EC:2.7.7.4) id=4848 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
translation elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
translation elongation factor Tu
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_6
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


4988..5320
DNA (333bp) protein (111aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
30S ribosomal protein S10 id=2824346 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpsJ; 30S ribosomal protein S10
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_7
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


5520..6155
DNA (636bp) protein (212aa)
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplC; 50S ribosomal protein L3
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_8
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(6235..6492)
DNA (258bp) protein (86aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


6536..7282
DNA (747bp) protein (249aa)
50S ribosomal protein L4P; K02926 large subunit ribosomal protein L4 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=96630 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L4P
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_10
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


7353..7766
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000376BEC7
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rplW; 50S ribosomal protein L23
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


7905..8732
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CMJ7_THEYO
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rplB; 50S ribosomal protein L2
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


8922..9227
DNA (306bp) protein (102aa)
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Ribosomal protein S19 id=2154530 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rpsS; ribosomal protein S19 (BS19)
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


9367..9876
DNA (510bp) protein (170aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=133702 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rplV; 50S ribosomal protein L22
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


9945..10631
DNA (687bp) protein (229aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU79_9ZZZZ
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rpsC; 30S ribosomal protein S3
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_15
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


10908..11324
DNA (417bp) protein (139aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
50S ribosomal protein L16 id=3736635 bin=GWC2_OD1_43_27 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
50S ribosomal protein L16
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


11331..11534
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=uncultured bacterium RepID=K2E043_9BACT
50S ribosomal protein L29 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_30914_17
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


11531..11806
DNA (276bp) protein (92aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
30S ribosomal protein S17 id=2154494 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S17
Displaying 17 items

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