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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(57..1160)
DNA (1104bp) protein (368aa)
Chaperone protein DnaJ n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2P5_THEOJ
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
chaperone protein DnaJ
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1354..3219)
DNA (1866bp) protein (622aa)
Chaperone protein DnaK n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=DNAK_UNCTG
chaperone protein DnaK ; K04043 molecular chaperone DnaK Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
chaperone protein DnaK
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3413..3850)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ENH0_9BACT
heat shock protein, Hsp20 family; K13993 HSP20 family protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Hsp20 family heat shock protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_4
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3975..4526)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D9D64
grpE; Protein GrpE Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
protein grpE
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

4904..5812
DNA (909bp) protein (303aa)
Mg2 transporter protein CorA family protein; K03284 magnesium transporter Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Mg2 transporter protein CorA family protein; K03284 metal ion transporter, MIT family id=2811 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Mg2 transporter protein CorA family protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_6
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

5923..7341
DNA (1419bp) protein (473aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
hypothetical protein, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FA1DA
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_7
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

7410..8780
DNA (1371bp) protein (457aa)
DNA helicase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374E9DF
Replicative DNA helicase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Replicative DNA helicase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_8
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

8834..9454
DNA (621bp) protein (207aa)
Recombination protein RecR n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SIA2_9BACT
recombination protein RecR; K06187 recombination protein RecR Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
recombination protein RecR
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(9482..9931)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035D89C0
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
50S ribosomal protein L21
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_10
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(9952..10989)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative DNA recombination protein id=4242140 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11265..11357)
DNA (93bp) protein (31aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11440..11655)
DNA (216bp) protein (72aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11631..12449)
DNA (819bp) protein (273aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] id=5097152 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
prolipoprotein diacylglyceryl transferase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(12517..12774)
DNA (258bp) protein (86aa)
elongation factor Tu domain 2 protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative uncharacterized protein id=2089522 bin=GWD2_Deltaproteobacteria_55_8 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Translation elongation factor-like protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_15
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(13160..14425)
DNA (1266bp) protein (422aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=96082 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(14568..16280)
DNA (1713bp) protein (571aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
ttr:Tter_1614 peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=3152180 bin=GWC1_OD1_38_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
peptidoglycan glycosyltransferase (EC:2.4.1.129)
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_17
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(16277..16609)
DNA (333bp) protein (111aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_18
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(16691..17629)
DNA (939bp) protein (313aa)
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003755721
S-adenosyl-methyltransferase MraW
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_19
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(17732..18163)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003622B12
MraZ protein; K03925 MraZ protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
MraZ protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_20
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(18200..18460)
DNA (261bp) protein (87aa)
hypothetical protein; K07461 putative endonuclease Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative uncharacterized protein id=2934224 bin=GWC1_OD1_38_17 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
excinuclease ABC subunit C
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_21
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(18755..19516)
DNA (762bp) protein (254aa)
fabG; 3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR id=2669948 bin=GWA1_ZB2_49_26 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_22
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(19685..20260)
DNA (576bp) protein (192aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
probable transcriptional regulator id=4790147 bin=GWC2_OD1_43_27 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_23
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(20310..20738)
DNA (429bp) protein (143aa)
50S ribosomal protein L7/L12 n=1 Tax=uncultured bacterium RepID=K2DLP9_9BACT
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rplL; 50S ribosomal protein L7/L12
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4842_24
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(20795..21349)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FA095
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
50S ribosomal protein L10
Displaying 24 items

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