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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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96..1217
DNA (1122bp) protein (374aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB46_AMMDK
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

1340..1651
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037E1C34
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

1690..3093
DNA (1404bp) protein (468aa)
phosphomannomutase; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2G1_THEOJ
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_4
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3163..3900)
DNA (738bp) protein (246aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Bacillus amyloliquefaciens subsp. plantarum UCMB5036 RepID=M1XG04_BACAM
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3929..4126)
DNA (198bp) protein (66aa)
tryptophan--tRNA ligase (EC:6.1.1.2) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
tryptophan--tRNA ligase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2F1R2_9BACT
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_6
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4162..4284)
DNA (123bp) protein (41aa)
Excinuclease ABC C subunit domain protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Excinuclease ABC C subunit domain protein id=3410576 bin=GWF2_Bacteroidetes_40_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_7
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4336..5214)
DNA (879bp) protein (293aa)
Peptide chain release factor 1 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RF1_CARHZ
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
prfA; peptide chain release factor 1
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_8
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(5211..5474)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035DA153
hypothetical protein; K02909 large subunit ribosomal protein L31 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


5642..6394
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=uncultured bacterium RepID=K1Z3T0_9BACT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rpsB; 30S ribosomal protein S2
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_10
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

6481..6930
DNA (450bp) protein (150aa)
translation elongation factor EFTs/EF1B dimerization; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Elongation factor Ts id=4209203 bin=GWF2_CPR3_35_18 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
translation elongation factor EFTs/EF1B dimerization
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

6927..7613
DNA (687bp) protein (229aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

8522..10762
DNA (2241bp) protein (747aa)
copper amine oxidase domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Uncharacterized protein id=4219073 bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
copper amine oxidase domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

10888..11199
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11273..11581
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD002 RepID=U3W5J7_CLODI
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_15
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11634..12356
DNA (723bp) protein (241aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_4
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific id=3013072 bin=GWC1_OD1_38_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

12362..13405
DNA (1044bp) protein (348aa)
Polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Polyprenyl synthetase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFK7_ACIB4
Polyprenyl synthetase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_17
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

13620..14312
DNA (693bp) protein (231aa)
protein-l-isoaspartate(d-aspartate) o-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
protein-l-isoaspartate(d-aspartate) o-methyltransferase (EC:2.1.1.77)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000362AC96
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_14333_18
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

14371..15369
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003737840
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
aminodeoxychorismate lyase
Displaying 18 items

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