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RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_1
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(3..134)
DNA (132bp) protein (44aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_trna_1
unknown

Not on your lists

651..723
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_2
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(1009..1383)
DNA (375bp) protein (125aa)
transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
hypothetical protein GobsU_33184 id=4916595 bin=GWA2_Elusimicrobia_69_24 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
transcriptional regulator
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_3
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

1491..1850
DNA (360bp) protein (120aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
histidine kinase (EC:2.7.13.3)
Regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HNM3_9SPHN
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_4
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(1852..2271)
DNA (420bp) protein (140aa)
diguanylate cyclase (GGDEF) domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Response regulator receiver protein id=2268991 bin=GWA2_Elusimicrobia_66_18 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
diguanylate cyclase (GGDEF) domain-containing protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_5
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(2280..3026)
DNA (747bp) protein (249aa)
fumarate reductase iron-sulfur protein; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit id=2319602 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
succinate dehydrogenase iron-sulfur subunit
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_6
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(3036..4949)
DNA (1914bp) protein (638aa)
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit id=2319601 bin=GWA2_Elusimicrobia_66_18 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
sdhA; succinate dehydrogenase flavoprotein subunit
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_7
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(4946..5593)
DNA (648bp) protein (216aa)
succinate dehydrogenase subunit c (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
succinate dehydrogenase subunit c (EC:1.3.5.1)
Putative cytochrome B subunit id=2319600 bin=GWA2_Elusimicrobia_66_18 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_8
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(5745..6269)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000365BAC4
N-acetyltransferase GCN5 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
N-acetyltransferase GCN5
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_9
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(6329..6964)
DNA (636bp) protein (212aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Uncharacterized protein (Fragment) id=2269011 bin=GWA2_Elusimicrobia_66_18 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_10
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

7019..7924
DNA (906bp) protein (302aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
MurB1 id=2269010 bin=GWA2_Elusimicrobia_66_18 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_11
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

7929..8726
DNA (798bp) protein (266aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
hypothetical protein id=2269009 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_12
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

8792..10033
DNA (1242bp) protein (414aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Cell division protein ftsA id=2269008 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cell division protein FtsA
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_13
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

10030..11166
DNA (1137bp) protein (379aa)
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Cell division protein FtsZ id=2269007 bin=GWA2_Elusimicrobia_66_18 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ftsZ; cell division protein FtsZ
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_14
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

11169..12260
DNA (1092bp) protein (364aa)
putative type II secretion system protein; K02669 twitching motility protein PilT Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Putative type II secretion system protein id=2269006 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
putative type II secretion system protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_15
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

12320..13030
DNA (711bp) protein (237aa)
dck; deoxyadenosine/deoxycytidine kinase (EC:2.7.1.76)
dak; deoxyadenosine kinase Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Deoxyadenosine kinase id=3841961 bin=GWA2_Elusimicrobia_69_24 species=Dictyostelium discoideum genus=Dictyostelium taxon_order=Dictyosteliida taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_16
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

13037..14146
DNA (1110bp) protein (370aa)
hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Histidinol-phosphate aminotransferase id=2269003 bin=GWA2_Elusimicrobia_66_18 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hisC; histidinol-phosphate aminotransferase
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_17
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

14176..14832
DNA (657bp) protein (219aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase id=2269002 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_18
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

14822..15427
DNA (606bp) protein (202aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
1-acyl-sn-glycerol-3-phosphate acyltransferases id=3841972 bin=GWA2_Elusimicrobia_69_24 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
1-acyl-sn-glycerol-3-phosphate acyltransferase
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_19
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists


15450..16607
DNA (1158bp) protein (386aa)
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Ribosomal protein S1 id=2269000 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
30S ribosomal protein S1
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_20
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

16607..17620
DNA (1014bp) protein (338aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
TPR Domain containing protein id=2268999 bin=GWA2_Elusimicrobia_66_18 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_21
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

17617..20514
DNA (2898bp) protein (966aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Peptidase S9B dipeptidylpeptidase IV domain protein id=3841978 bin=GWA2_Elusimicrobia_69_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
peptidase S9B dipeptidylpeptidase IV domain-containing protein
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_22
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(20704..21090)
DNA (387bp) protein (129aa)
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_23
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

21237..21818
DNA (582bp) protein (194aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
Diaminopimelate decarboxylase id=2268998 bin=GWA2_Elusimicrobia_66_18 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
diaminopimelate decarboxylase
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_24
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(21837..22283)
DNA (447bp) protein (149aa)
transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
DNA-binding response regulator id=4879217 bin=GWA2_Elusimicrobia_69_24 species=Aerococcus viridans genus=Aerococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
transcriptional regulator
RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_rifcsphigho2_02_scaffold_3922_25
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

22384..22830
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
hypothetical protein id=4381630 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Displaying 26 items

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