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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_1
RHI_OD1_44_17, Parcubacteria, Bacteria

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comp(2..2941)
DNA (2940bp) protein (980aa)
PGAP1 family protein n=1 Tax=uncultured bacterium RepID=K2F2Q4_9BACT
PGAP1 family protein n=1 Tax=uncultured bacterium RepID=K2F2Q4_9BACT
Lecithin:cholesterol acyltransferase Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Lecithin:cholesterol acyltransferase Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

3680..4057
DNA (378bp) protein (126aa)
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
UPF0102 protein ANT_20920 id=3736371 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
UPF0102 protein ANT_20920 id=3736371 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_3
RHI_OD1_44_17, Parcubacteria, Bacteria

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4175..4450
DNA (276bp) protein (92aa)
SSU ribosomal protein S20P Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
SSU ribosomal protein S20P Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=15189999 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=15189999 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(4414..5193)
DNA (780bp) protein (260aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(5190..6068)
DNA (879bp) protein (293aa)
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPHIGHO2_12_FULL_OD1
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPHIGHO2_12_FULL_OD1
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(6072..7418)
DNA (1347bp) protein (449aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
PAS domain S-box protein id=15190590 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
PAS domain S-box protein id=15190590 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(7426..8733)
DNA (1308bp) protein (436aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA polymerase i; K02335 DNA polymerase I [EC:2.7.7.7] id=15190062 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA polymerase i; K02335 DNA polymerase I [EC:2.7.7.7] id=15190062 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(8734..9621)
DNA (888bp) protein (296aa)
polA-2; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
polA-2; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA polymerase i; K02335 DNA polymerase I [EC:2.7.7.7] id=15190062 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA polymerase i; K02335 DNA polymerase I [EC:2.7.7.7] id=15190062 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_22163_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(9618..9908)
DNA (291bp) protein (97aa)
Uncharacterized protein family UPF0079, ATPase Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Uncharacterized protein family UPF0079, ATPase Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Uncharacterized protein family UPF0079, ATPase id=1817062 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Uncharacterized protein family UPF0079, ATPase id=1817062 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Displaying 9 items

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