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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_1
RHI_OD1_44_17, Parcubacteria, Bacteria

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1..249
DNA (249bp) protein (83aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=133701 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=133701 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


256..456
DNA (201bp) protein (67aa)
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=15190545 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=15190545 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_3
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


453..695
DNA (243bp) protein (81aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
30S ribosomal protein S17 id=2824254 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S17 id=2824254 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


692..1060
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rplN; 50S ribosomal protein L14 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=15190543 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=15190543 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


1069..1386
DNA (318bp) protein (106aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
LSU ribosomal protein L24P id=15190542 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
LSU ribosomal protein L24P id=15190542 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


1368..1856
DNA (489bp) protein (163aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=15190541 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=15190541 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


1866..2051
DNA (186bp) protein (62aa)
ribosomal protein S14 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
ribosomal protein S14 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 id=15190540 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 id=15190540 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


2079..2462
DNA (384bp) protein (128aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=133712 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=133712 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


2470..3015
DNA (546bp) protein (182aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=15190538 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=15190538 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_10
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


3081..3383
DNA (303bp) protein (101aa)
50S ribosomal protein L18 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EC56_9CHLR
50S ribosomal protein L18 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EC56_9CHLR
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_11
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


3386..3850
DNA (465bp) protein (155aa)
30S ribosomal protein S5 n=1 Tax=uncultured bacterium RepID=K1X247_9BACT
30S ribosomal protein S5 n=1 Tax=uncultured bacterium RepID=K1X247_9BACT
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_12
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


3858..4244
DNA (387bp) protein (129aa)
50S ribosomal protein L15 n=1 Tax=uncultured bacterium RepID=K1YFB3_9BACT
50S ribosomal protein L15 n=1 Tax=uncultured bacterium RepID=K1YFB3_9BACT
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_13
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


4256..5518
DNA (1263bp) protein (421aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=15190533 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=15190533 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_14
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

5562..6236
DNA (675bp) protein (225aa)
nucleoside-triphosphate--adenylate kinase (EC:2.7.4.10); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
nucleoside-triphosphate--adenylate kinase (EC:2.7.4.10); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] id=15190529 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] id=15190529 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_15
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

6244..7002
DNA (759bp) protein (253aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Methionine aminopeptidase id=3736730 bin=GWC2_OD1_43_27 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Methionine aminopeptidase id=3736730 bin=GWC2_OD1_43_27 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_19477_16
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

7065..7526
DNA (462bp) protein (154aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8R2_SINAD
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8R2_SINAD
membrane protease subunit, stomatin/prohibitin Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
membrane protease subunit, stomatin/prohibitin Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Displaying 16 items

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