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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_1
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(2..298)
DNA (297bp) protein (99aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(618..1388)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000371B1E2
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000371B1E2
hypothetical protein; K09807 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein; K09807 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_3
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(1419..2129)
DNA (711bp) protein (237aa)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
triosephosphate isomerase (EC:5.3.1.1)
triosephosphate isomerase (EC:5.3.1.1)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(2150..2788)
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein id=15190587 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein id=15190587 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(2951..4816)
DNA (1866bp) protein (622aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 id=133115 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 id=133115 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(4788..5243)
DNA (456bp) protein (152aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(5245..5946)
DNA (702bp) protein (234aa)
Cell shape-determining protein MreC Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Cell shape-determining protein MreC Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Cell shape-determining protein MreC id=15190324 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Cell shape-determining protein MreC id=15190324 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(5951..6997)
DNA (1047bp) protein (349aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
mreB2; MreB id=15190323 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
mreB2; MreB id=15190323 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


comp(7007..8437)
DNA (1431bp) protein (477aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Proline--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EH07_9BACT
Proline--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EH07_9BACT
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_10
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(8444..9484)
DNA (1041bp) protein (347aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZ28_9BACT
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZ28_9BACT
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_11
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(9485..10018)
DNA (534bp) protein (178aa)
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
ribosome recycling factor; K02838 ribosome recycling factor id=15190034 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
ribosome recycling factor; K02838 ribosome recycling factor id=15190034 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_12
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(9997..10830)
DNA (834bp) protein (278aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta' (EC:2.7.7.7)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_13
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(10830..11840)
DNA (1011bp) protein (337aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=15190213 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=15190213 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_14
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

12049..13560
DNA (1512bp) protein (504aa)
XRE family transcriptional regulator; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
XRE family transcriptional regulator; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
id=5226949 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
id=5226949 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_8096_15
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(13626..13922)
DNA (297bp) protein (99aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8R2_SINAD
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8R2_SINAD
membrane protease subunit, stomatin/prohibitin Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
membrane protease subunit, stomatin/prohibitin Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Displaying 15 items

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