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RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29

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Displaying items 1-30 of 199 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..219)
DNA (141bp) protein (47aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Rhodobacter sp. SW2 RepID=C8S229_9RHOB
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hrcA; heat-inducible transcription repressor HrcA
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

333..1052
DNA (720bp) protein (240aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
rph; RNAse PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EL78_9RHOB
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1049..1660
DNA (612bp) protein (204aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S227_9RHOB
putative deoxyribonucleotide triphosphate pyrophosphatase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1696..2031
DNA (336bp) protein (112aa)
Endoribonuclease L-PSP n=2 Tax=Rhodobacter RepID=B9KPU6_RHOSK
endoribonuclease L-PSP Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
endoribonuclease L-PSP
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2035..3192
DNA (1158bp) protein (386aa)
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WVY4_RHOS5
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3194..3547
DNA (354bp) protein (118aa)
Membrane protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIR3_9RHOB
hypothetical protein; K09790 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3522..4436)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AEA6_9BACT
Chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Chromosome segregation DNA-binding protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4436..5263)
DNA (828bp) protein (276aa)
Chromosome partitioning protein ParA n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIF5_9RHOB
parA; chromosome-partitioning protein ParA; K03496 chromosome partitioning protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
parA; chromosome-partitioning protein ParA
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5256..5882)
DNA (627bp) protein (209aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=uncultured bacterium RepID=K2BCR8_9BACT
methyltransferase GidB
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5879..7759)
DNA (1881bp) protein (627aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=uncultured bacterium RepID=K2AU69_9BACT
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
gidA; glucose-inhibited division protein A rbh
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7756..9039)
DNA (1284bp) protein (428aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
tRNA modification GTPase MnmE n=1 Tax=uncultured bacterium RepID=K2ADW2_9BACT
trmE; tRNA modification GTPase TrmE
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_12
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9067..10338)
DNA (1272bp) protein (424aa)
Transcription termination factor Rho n=1 Tax=uncultured bacterium RepID=K2AEA2_9BACT
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
rho; transcription termination factor Rho
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_13
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10462..10911)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZWA2_9BACT
hypothetical protein; K08973 putative membrane protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11323..11922
DNA (600bp) protein (200aa)
Maf-like protein ACD_54C01029G0001 n=1 Tax=uncultured bacterium RepID=K2BCR4_9BACT
Maf family protein; K06287 septum formation protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Maf family protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_15
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11919..12758
DNA (840bp) protein (280aa)
aroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Shikimate dehydrogenase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S216_9RHOB
aroE; shikimate 5-dehydrogenase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12755..13342
DNA (588bp) protein (196aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=uncultured bacterium RepID=K2ADX2_9BACT
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13335..14033
DNA (699bp) protein (233aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AEB1_9BACT
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14092..14586)
DNA (495bp) protein (165aa)
Protein-export protein SecB n=5 Tax=Rhodobacter RepID=SECB_RHOS1
secB; preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
preprotein translocase subunit SecB
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14644..15120)
DNA (477bp) protein (159aa)
exlusion protein FxsA n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B61525
fxsA; FxsA cytoplasmic membrane protein; K07113 UPF0716 protein FxsA Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
FxsA protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15235..15894
DNA (660bp) protein (220aa)
Import inner membrane translocase, subunit Tim44 n=1 Tax=uncultured bacterium RepID=K2BCH6_9BACT
import inner membrane translocase subunit Tim44 Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
import inner membrane translocase subunit Tim44
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15907..16923
DNA (1017bp) protein (339aa)
MltA domain-containing protein; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZW29_9BACT
MltA domain-containing protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16927..17538
DNA (612bp) protein (204aa)
DNA mismatch repair protein MutS n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ER23_9RHOB
Smr protein/MutS2 Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Smr protein/MutS2
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17578..18816)
DNA (1239bp) protein (413aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein PaTRP_00655 id=2938026 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus sp. TRP genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18861..19322
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AE24_9BACT
endoribonuclease L-PSP Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
endoribonuclease L-PSP
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19322..20092
DNA (771bp) protein (257aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KF52_9RHOB
glycerophosphoryl diester phosphodiesterase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
glycerophosphoryl diester phosphodiesterase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_26
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20151..21296
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJJ6_9RHOB
hypothetical protein; K09919 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21312..21920
DNA (609bp) protein (203aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Glutathione S-transferase, N-terminal domain n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WP49_RHOS5
glutathione S-transferase domain-containing protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_28
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21917..22288
DNA (372bp) protein (124aa)
Pcbd2, 2700061N24Rik, Dcoh2, Dcohm; pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin deh
Putative pterin-4-alpha-carbinolamine dehydratase id=2641339 bin=GWF1_Rhodobacteraceae_65_7 species=alpha proteobacterium JLT2015 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_29
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22327..22815)
DNA (489bp) protein (163aa)
peroxiredoxin (EC:1.11.1.15) Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=4 Tax=Rhodobacter capsulatus RepID=D5ASP6_RHOCB
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_29_30
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22895..24103
DNA (1209bp) protein (403aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2AG03_9BACT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying items 1-30 of 199 in total

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