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RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6..149)
DNA (144bp) protein (48aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein PaTRP_15792 id=2696149 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus sp. TRP genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160..651)
DNA (492bp) protein (164aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein PaTRP_15787 id=2696147 bin=GWF1_Rhodobacteraceae_65_7 species=Paracoccus sp. TRP genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(754..1272)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NMW6_RHISP
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1391..1831)
DNA (441bp) protein (147aa)
DNA repair protein RadC Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
DNA repair protein id=2696111 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
DNA repair protein RadC
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1981..2433)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1R6_9RHOB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2433..4289)
DNA (1857bp) protein (619aa)
RNA-directed DNA polymerase (EC:2.7.7.49); K00986 RNA-directed DNA polymerase [EC:2.7.7.49] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EDE4_9SPHN
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4873..5721)
DNA (849bp) protein (283aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Uncharacterized protein id=2742549 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5859..6764)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F51A
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6804..7400
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F519
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_10

Not on your lists

comp(7456..7860)
DNA (405bp) protein (135aa)
Single-stranded DNA-binding protein n=1 Tax=uncultured bacterium RepID=C6KU55_9BACT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=77133 species="Bacteria; environmental samples
single-stranded DNA-binding protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8286..8606
DNA (321bp) protein (107aa)
Histone-like nucleoid-structuring protein H-NS n=1 Tax=Roseovarius sp. 217 RepID=A3W8N5_9RHOB
histone family protein nucleoid-structuring protein H-NS Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
histone family protein nucleoid-structuring protein H-NS
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_12
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9005..9886)
DNA (882bp) protein (294aa)
Helix-turn-helix, AraC type: AraC protein n=1 Tax=uncultured bacterium RepID=K2BH12_9BACT
putative transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
putative transcriptional regulator
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_13
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9940..11142)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A3U3I1_9RHOB
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
carnitine dehydratase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_14
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11142..12296)
DNA (1155bp) protein (385aa)
Iron-containing alcohol dehydrogenase n=3 Tax=Rhodobacteraceae RepID=A9EB90_9RHOB
iron-containing alcohol dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
iron-containing alcohol dehydrogenase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_15
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12314..13477)
DNA (1164bp) protein (388aa)
butyryl-CoA dehydrogenase; K06446 acyl-CoA dehydrogenase [EC:1.3.99.-] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AGX5_9BACT
butyryl-CoA dehydrogenase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_16
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13492..14283)
DNA (792bp) protein (264aa)
Transcriptional regulator, IclR family protein n=1 Tax=uncultured bacterium RepID=K2AH18_9BACT
transcriptional regulator, IclR family Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
transcriptional regulator, IclR family
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14417..15913
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AX04_9BACT
aldehyde dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
aldehyde dehydrogenase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15922..17997
DNA (2076bp) protein (692aa)
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein n=2 Tax=Rhodobacteraceae RepID=A9EB96_9RHOB
3-hydroxyacyl-CoA dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
3-hydroxyacyl-CoA dehydrogenase
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18205..19107
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZY03_9BACT
Alpha/beta hydrolase fold-3 Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Alpha/beta hydrolase fold-3
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19222..20859
DNA (1638bp) protein (546aa)
Flavin-containing monooxygenase FMO:FAD dependent oxidoreductase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U3H1_9RHOB
flavin-containing monooxygenase FMO Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
flavin-containing monooxygenase FMO
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20947..21702
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AFX9_9BACT
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
short-chain dehydrogenase/reductase SDR
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21771..22532
DNA (762bp) protein (254aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EHT9_9RHOB
eftB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
eftB; electron transfer flavoprotein subunit beta
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22534..23460
DNA (927bp) protein (309aa)
electron transfer flavoprotein subunit beta n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B727A0
etfA; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
etfA; electron transfer flavoprotein subunit alpha
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23484..24683
DNA (1200bp) protein (400aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
beta-ketoadipyl CoA thiolase (EC:2.3.1.9) rbh
3-oxoadipyl-CoA thiolase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BC38_PARDP
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24795..24941
DNA (147bp) protein (49aa)
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_26
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25525..26760
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKT8_AFIFE
site-specific recombinase XerD Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
site-specific recombinase XerD
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26757..27716
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEL2_AFIFE
tyrosine recombinase XerD Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
tyrosine recombinase XerD
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_28
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27709..28719
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH06_AFIFE
tyrosine recombinase XerC Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
tyrosine recombinase XerC
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_29
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28793..28969)
DNA (177bp) protein (59aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Uncharacterized protein id=2479267 bin=GWF1_Rhodobacteraceae_65_7 species=Celeribacter baekdonensis genus=Celeribacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_2455_30
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29358..29831)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000364A9B0
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
Displaying items 1-30 of 43 in total

View Taxonomy