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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141..674
DNA (534bp) protein (178aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Peptide deformylase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TDY7_9GAMM
def; peptide deformylase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(705..3281)
DNA (2577bp) protein (859aa)
glnD; PII uridylyl-transferase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PII uridylyl-transferase n=1 Tax=Methyloversatilis universalis RepID=UPI0003723CC0
uridylyl-removing enzyme
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3298..4098)
DNA (801bp) protein (267aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5Q2_NITMU
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4260..5006
DNA (747bp) protein (249aa)
30S ribosomal protein S2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS2_NITMU
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
rpsB; 30S ribosomal protein S2
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5081..5920
DNA (840bp) protein (280aa)
Elongation factor Ts (EF-Ts) n=1 Tax=mine drainage metagenome RepID=E6QQJ6_9ZZZZ
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
tsf; elongation factor Ts
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5942..6655
DNA (714bp) protein (238aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Uridylate kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPE1_AZOSU
uridylate kinase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6670..7230
DNA (561bp) protein (187aa)
Ribosome recycling factor (Ribosome-releasing factor) (RRF) n=1 Tax=mine drainage metagenome RepID=E6PS41_9ZZZZ
Ribosome-recycling factor; K02838 ribosome recycling factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ribosome-recycling factor
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7241..8041
DNA (801bp) protein (267aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LPK3_9BURK
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8046..8864
DNA (819bp) protein (273aa)
cdsA; putative phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
cdsA; putative phosphatidate cytidylyltransferase (EC:2.7.7.41)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00037FD5C8
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8861..10075
DNA (1215bp) protein (405aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=blood disease bacterium R229 RepID=G2ZTB1_9RALS
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10072..11436
DNA (1365bp) protein (455aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
peptidase n=1 Tax=Thiobacillus thioparus RepID=UPI000366C62E
membrane-associated zinc metalloprotease
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11440..13716
DNA (2277bp) protein (759aa)
Outer membrane protein assembly factor BamA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACC0_9PROT
surface antigen (D15) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
outer membrane protein assembly complex, YaeT protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13722..14243
DNA (522bp) protein (174aa)
Putative outer membrane protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZG6_AROAE
outer membrane protein; K06142 outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
outer membrane protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14245..15279
DNA (1035bp) protein (345aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Azoarcus toluclasticus RepID=UPI00035FE503
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15272..15730
DNA (459bp) protein (153aa)
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPD2_AZOSU
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15727..16497
DNA (771bp) protein (257aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPD1_AZOSU
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16497..17657
DNA (1161bp) protein (387aa)
lipid-A-disaccharide synthase; K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Lipid-A-disaccharide synthase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPD0_AZOSU
lipid-A-disaccharide synthase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_13461_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..17781
DNA (141bp) protein (47aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Ribonuclease HII (EC:3.1.26.4)
ribonuclease HII n=1 Tax=Cupriavidus sp. WS RepID=UPI00036266B3
Displaying 19 items

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