ggKbase home page

RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..859
DNA (858bp) protein (286aa)
Lipoprotein cytochrome c n=2 Tax=Geobacter metallireducens RepID=Q39X72_GEOMG
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
cytochrome C
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

882..1109
DNA (228bp) protein (76aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1132..2097
DNA (966bp) protein (322aa)
Cytochrome C family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2C6_NITHN
cytochrome C family protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
cytochrome C family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2130..4205
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B5C2C3
outer membrane protein MtrB Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
outer membrane protein MtrB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4213..4701)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CCS9_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4710..5915)
DNA (1206bp) protein (402aa)
General secretion pathway protein F n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ94_9PROT
general secretion pathway protein F; K02455 general secretion pathway protein F Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway protein F
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5920..7389)
DNA (1470bp) protein (490aa)
General secretion pathway protein E n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVY1_9PROT
type II secretion system protein E; K02454 general secretion pathway protein E Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
type II secretion system protein E
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7386..9464)
DNA (2079bp) protein (693aa)
Type II and III secretion system protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ3_9GAMM
type II and III secretion system protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
type II and III secretion system protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9506..9985)
DNA (480bp) protein (160aa)
Putative general secretion pathway related transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLE6_9PROT
putative general secretion pathway related transmembrane protein; K02452 general secretion pathway protein C Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
putative general secretion pathway related transmembrane protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10107..10541
DNA (435bp) protein (145aa)
General secretion pathway protein G n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKQ5_9PROT
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway protein G
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10588..11064
DNA (477bp) protein (159aa)
General secretion pathway protein H n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLE1_9PROT
general secretion pathway protein H; K02457 general secretion pathway protein H Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway protein H
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11051..11437
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKS9_9PROT
general secretion pathway protein I; K02458 general secretion pathway protein I Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway protein I
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11434..12030
DNA (597bp) protein (199aa)
General secretion pathway protein J n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ86_9PROT
general secretion pathway protein J; K02459 general secretion pathway protein J Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway protein J
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12030..12944
DNA (915bp) protein (305aa)
Type II secretion system protein K n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVW9_9PROT
general secretion pathway protein K; K02460 general secretion pathway protein K Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway protein K
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12941..14152
DNA (1212bp) protein (404aa)
General secretion pathway protein L n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKQ2_9PROT
general secretion pathway L; K02461 general secretion pathway protein L Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway L
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14149..14640
DNA (492bp) protein (164aa)
General secretion pathway M protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7T4_NITMU
general secretion pathway M protein; K02462 general secretion pathway protein M Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
general secretion pathway M protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14928..15302
DNA (375bp) protein (125aa)
General secretory pathway protein N n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ5_9GAMM
type II secretion system protein N; K02463 general secretion pathway protein N Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
type II secretion system protein N
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_18
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15335..16360)
DNA (1026bp) protein (342aa)
bilirubin oxidase (EC:1.3.3.5) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
bilirubin oxidase (EC:1.3.3.5)
Bilirubin oxidase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6Q2_STRRD
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16399..17292)
DNA (894bp) protein (298aa)
Bilirubin oxidase (EC:1.3.3.5) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Bilirubin oxidase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7L9_ANADF
bilirubin oxidase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_20
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17582..17800
DNA (219bp) protein (73aa)
Fibronectin type III domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WNH9_GEOS8
fibronectin type III domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
fibronectin type III domain-containing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18070..19494
DNA (1425bp) protein (475aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Putative geranylgeranyl reductase id=1749073 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_22
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19487..19924
DNA (438bp) protein (146aa)
Crp/Fnr family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Cyclic nucleotide-binding transcriptional regulator, putative id=2556893 bin=GWC2_Methylomirabilis_70_16 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Crp/Fnr family transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_23
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19935..21575
DNA (1641bp) protein (547aa)
Iron-sulfur-binding protein, glutamate synthase subunit (DsrL/GltD) n=1 Tax=uncultured sulfate-reducing bacterium RepID=Q3IBS8_9BACT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_24
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21572..22069)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000364D556
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_25
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22056..23450)
DNA (1395bp) protein (465aa)
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
threonine synthase (EC:4.2.3.1)
L-threonine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8R8_NITMU
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_31619_26
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23450..23623)
DNA (174bp) protein (58aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Homoserine dehydrogenase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EI11_9BURK
homoserine dehydrogenase
Displaying 26 items

View Taxonomy