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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_1

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: 1..360

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XX72_9BACT id=720308 bin=RAAC39 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC39 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 117.0
  • Bit_score: 86
  • Evalue 2.10e-14
sigma-24 (FecI-like protein); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 240
  • Evalue 1.60e-60
RNA polymerase sigma factor SigW similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 116.0
  • Bit_score: 85
  • Evalue 1.30e-14

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Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
TACGACCCGAGGTTCAAGTTCTTCAGTTGGATCTGTCGCATTTCGATCAATGAGTCACTTAATTTGCTGCGCCGCAACGGACGCGAAGAGCAGCTTGACGACGAGATCGACCTTCCGGATCCTGAATATGTCAATCCGGAAGCGCAGGCGAGTGCAGCGCAGCAATCAGCCCGGATCCAGGGTGCCCTGATGGGAATGAAACTCGAGCATCGCGTGGTGCTGACGTTGCGCCACTTTTCGGAGTGCAGCTATCGGGAAATCGGGCAGATCTTGGAGATTGACGAGAAGACCGTGAAGTCCCGTCTGTTCGACGCAAGGCAGCGCTTGCGCGAGCTGCTGAAAGACCTTCATAAGGCCTGA
PROTEIN sequence
Length: 120
YDPRFKFFSWICRISINESLNLLRRNGREEQLDDEIDLPDPEYVNPEAQASAAQQSARIQGALMGMKLEHRVVLTLRHFSECSYREIGQILEIDEKTVKSRLFDARQRLRELLKDLHKA*