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RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..360
DNA (360bp) protein (120aa)
RNA polymerase sigma factor n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XX72_9BACT id=720308 bin=RAAC39 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC39 organism_group=Ignavibacteria
sigma-24 (FecI-like protein); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
RNA polymerase sigma factor SigW
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(937..1431)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Metarhizium acridum (strain CQMa 102) RepID=E9EGY3_METAQ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
pchF; pyochelin synthetase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1566..4529
DNA (2964bp) protein (988aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein id=24533808 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Prevotella ruminicola genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4552..5565
DNA (1014bp) protein (338aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Putative uncharacterized protein id=4396968 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5594..5782)
DNA (189bp) protein (63aa)
SDR family dehydrogenase/reductase (EC:1.1.1.184) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SDR family dehydrogenase/reductase (EC:1.1.1.184)
Dehydrogenase with different specificities n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSA2_9PROT
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5978..6805
DNA (828bp) protein (276aa)
Transcriptional regulator, IclR family n=1 Tax=Burkholderia sp. YI23 RepID=G8MG82_9BURK
iclR; IclR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
iclR; IclR family transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6843..7469
DNA (627bp) protein (209aa)
Phosphate transport regulator n=2 Tax=Burkholderia RepID=I5CPX2_9BURK
hypothetical protein; K07220 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7539..8552
DNA (1014bp) protein (338aa)
Phosphate/sulfate permease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHG5_AZOSU
phosphate/sulfate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
phosphate/sulfate permease
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8598..9041)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYX9_9RHIZ
hypothetical protein; K09796 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9095..10189)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D379_BRAJP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10204..11094)
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YWU4_9RHIZ
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
alpha/beta hydrolase fold protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11140..11874
DNA (735bp) protein (245aa)
short chain dehydrogenase (EC:1.-.-.-); K00540 [EC:1.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
short chain dehydrogenase (EC:1.-.-.-)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YID4_9BRAD
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11939..12913
DNA (975bp) protein (325aa)
oxidoreductase (EC:1.-.-.-); K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
oxidoreductase (EC:1.-.-.-)
Probable oxidoreductase protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8Y041_RALSO
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13019..13534)
DNA (516bp) protein (172aa)
Phosphinothricin acetyltransferase (PPT N-acetyltransferase) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALY8_AZOBR
pat1; phosphinothricin acetyltransferase (PPT N-acetyltransferase) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
pat1; phosphinothricin acetyltransferase (PPT N-acetyltransferase)
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13542..16442)
DNA (2901bp) protein (967aa)
PAS domain S-box protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1B1_9PROT
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
diguanylate cyclase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_4670_16
unknown

Not on your lists

comp(16560..16628)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 16 items

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